Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.17■■□□□ 1.14
PCDHB9Q9Y5E1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHB9Q9Y5E1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
PCDHB9Q9Y5E1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.16■■□□□ 1.14
PCDHB9Q9Y5E1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
PCDHB9Q9Y5E1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
PCDHB9Q9Y5E1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDHB9Q9Y5E1 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.16■■□□□ 1.14
PCDHB9Q9Y5E1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHB9Q9Y5E1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDHB9Q9Y5E1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHB9Q9Y5E1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.15■■□□□ 1.14
PCDHB9Q9Y5E1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.15■■□□□ 1.14
PCDHB9Q9Y5E1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB9Q9Y5E1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
PCDHB9Q9Y5E1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.15■■□□□ 1.14
PCDHB9Q9Y5E1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB9Q9Y5E1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.15■■□□□ 1.14
PCDHB9Q9Y5E1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22.15■■□□□ 1.14
PCDHB9Q9Y5E1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC22.15■■□□□ 1.14
PCDHB9Q9Y5E1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB9Q9Y5E1 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB9Q9Y5E1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.15■■□□□ 1.14
PCDHB9Q9Y5E1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.15■■□□□ 1.14
PCDHB9Q9Y5E1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB9Q9Y5E1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB9Q9Y5E1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB9Q9Y5E1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
PCDHB9Q9Y5E1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHB9Q9Y5E1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHB9Q9Y5E1 TSPY26P-201ENST00000476365 1326 ntBASIC22.14■■□□□ 1.14
PCDHB9Q9Y5E1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHB9Q9Y5E1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHB9Q9Y5E1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
PCDHB9Q9Y5E1 ID1-201ENST00000376105 1233 ntBASIC22.14■■□□□ 1.13
PCDHB9Q9Y5E1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.14■■□□□ 1.13
PCDHB9Q9Y5E1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.14■■□□□ 1.13
PCDHB9Q9Y5E1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHB9Q9Y5E1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
PCDHB9Q9Y5E1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.14■■□□□ 1.13
PCDHB9Q9Y5E1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHB9Q9Y5E1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.13■■□□□ 1.13
PCDHB9Q9Y5E1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
PCDHB9Q9Y5E1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.13■■□□□ 1.13
PCDHB9Q9Y5E1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHB9Q9Y5E1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC22.13■■□□□ 1.13
PCDHB9Q9Y5E1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.13■■□□□ 1.13
PCDHB9Q9Y5E1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.13■■□□□ 1.13
PCDHB9Q9Y5E1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.13■■□□□ 1.13
PCDHB9Q9Y5E1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHB9Q9Y5E1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.13■■□□□ 1.13
PCDHB9Q9Y5E1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHB9Q9Y5E1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHB9Q9Y5E1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.13■■□□□ 1.13
PCDHB9Q9Y5E1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHB9Q9Y5E1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHB9Q9Y5E1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.12■■□□□ 1.13
PCDHB9Q9Y5E1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHB9Q9Y5E1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHB9Q9Y5E1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
PCDHB9Q9Y5E1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
PCDHB9Q9Y5E1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.12■■□□□ 1.13
PCDHB9Q9Y5E1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHB9Q9Y5E1 AL358852.1-201ENST00000623174 1268 ntBASIC22.12■■□□□ 1.13
PCDHB9Q9Y5E1 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHB9Q9Y5E1 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
PCDHB9Q9Y5E1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHB9Q9Y5E1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHB9Q9Y5E1 LINC01960-201ENST00000563759 1884 ntBASIC22.11■■□□□ 1.13
PCDHB9Q9Y5E1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.11■■□□□ 1.13
PCDHB9Q9Y5E1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHB9Q9Y5E1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHB9Q9Y5E1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.11■■□□□ 1.13
PCDHB9Q9Y5E1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHB9Q9Y5E1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHB9Q9Y5E1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHB9Q9Y5E1 DUX4L2-201ENST00000561772 1275 ntBASIC22.11■■□□□ 1.13
PCDHB9Q9Y5E1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.11■■□□□ 1.13
PCDHB9Q9Y5E1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.11■■□□□ 1.13
PCDHB9Q9Y5E1 DUX4L6-201ENST00000626483 1275 ntBASIC22.11■■□□□ 1.13
PCDHB9Q9Y5E1 DUX4L1-201ENST00000627662 1275 ntBASIC22.11■■□□□ 1.13
PCDHB9Q9Y5E1 DUX4L8-201ENST00000629013 1275 ntBASIC22.11■■□□□ 1.13
PCDHB9Q9Y5E1 DUX4L3-201ENST00000630187 1275 ntBASIC22.11■■□□□ 1.13
PCDHB9Q9Y5E1 DUX4L7-201ENST00000630678 1275 ntBASIC22.11■■□□□ 1.13
PCDHB9Q9Y5E1 DUX4L5-201ENST00000630834 1275 ntBASIC22.11■■□□□ 1.13
PCDHB9Q9Y5E1 AL031602.1-201ENST00000633169 911 ntBASIC22.11■■□□□ 1.13
PCDHB9Q9Y5E1 C1orf229-201ENST00000623686 2258 ntBASIC22.11■■□□□ 1.13
PCDHB9Q9Y5E1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHB9Q9Y5E1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHB9Q9Y5E1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
PCDHB9Q9Y5E1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHB9Q9Y5E1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHB9Q9Y5E1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHB9Q9Y5E1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.11■■□□□ 1.13
PCDHB9Q9Y5E1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.1■■□□□ 1.13
PCDHB9Q9Y5E1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
PCDHB9Q9Y5E1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHB9Q9Y5E1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHB9Q9Y5E1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
PCDHB9Q9Y5E1 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms