Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00588Q9Y4M8 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
LINC00588Q9Y4M8 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LINC00588Q9Y4M8 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC14.98□□□□□ -0.01
LINC00588Q9Y4M8 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC14.98□□□□□ -0.01
LINC00588Q9Y4M8 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LINC00588Q9Y4M8 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00588Q9Y4M8 KRT18P14-201ENST00000534205 1250 ntBASIC14.98□□□□□ -0.01
LINC00588Q9Y4M8 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC14.98□□□□□ -0.01
LINC00588Q9Y4M8 SMUG1P1-201ENST00000590640 811 ntBASIC14.98□□□□□ -0.01
LINC00588Q9Y4M8 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC14.98□□□□□ -0.01
LINC00588Q9Y4M8 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC14.98□□□□□ -0.01
LINC00588Q9Y4M8 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC14.98□□□□□ -0.01
LINC00588Q9Y4M8 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00588Q9Y4M8 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00588Q9Y4M8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00588Q9Y4M8 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LINC00588Q9Y4M8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
LINC00588Q9Y4M8 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00588Q9Y4M8 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00588Q9Y4M8 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00588Q9Y4M8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC14.97□□□□□ -0.01
LINC00588Q9Y4M8 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00588Q9Y4M8 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC14.97□□□□□ -0.01
LINC00588Q9Y4M8 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00588Q9Y4M8 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00588Q9Y4M8 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
LINC00588Q9Y4M8 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00588Q9Y4M8 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC14.97□□□□□ -0.01
LINC00588Q9Y4M8 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
LINC00588Q9Y4M8 KRT18P5-201ENST00000436075 1291 ntBASIC14.97□□□□□ -0.01
LINC00588Q9Y4M8 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC14.97□□□□□ -0.01
LINC00588Q9Y4M8 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC14.97□□□□□ -0.01
LINC00588Q9Y4M8 TERF1P2-201ENST00000583350 1212 ntBASIC14.97□□□□□ -0.01
LINC00588Q9Y4M8 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00588Q9Y4M8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00588Q9Y4M8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC14.97□□□□□ -0.01
LINC00588Q9Y4M8 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00588Q9Y4M8 LINC01960-201ENST00000563759 1884 ntBASIC14.97□□□□□ -0.01
LINC00588Q9Y4M8 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00588Q9Y4M8 BX005040.4-201ENST00000637145 1518 ntBASIC14.97□□□□□ -0.01
LINC00588Q9Y4M8 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00588Q9Y4M8 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00588Q9Y4M8 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC14.96□□□□□ -0.01
LINC00588Q9Y4M8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00588Q9Y4M8 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00588Q9Y4M8 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00588Q9Y4M8 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00588Q9Y4M8 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC14.96□□□□□ -0.01
LINC00588Q9Y4M8 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
LINC00588Q9Y4M8 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00588Q9Y4M8 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC14.96□□□□□ -0.01
LINC00588Q9Y4M8 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC14.96□□□□□ -0.01
LINC00588Q9Y4M8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC14.96□□□□□ -0.01
LINC00588Q9Y4M8 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC14.96□□□□□ -0.01
LINC00588Q9Y4M8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC14.96□□□□□ -0.01
LINC00588Q9Y4M8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC14.96□□□□□ -0.01
LINC00588Q9Y4M8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00588Q9Y4M8 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00588Q9Y4M8 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC14.96□□□□□ -0.01
LINC00588Q9Y4M8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00588Q9Y4M8 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC14.96□□□□□ -0.02
LINC00588Q9Y4M8 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00588Q9Y4M8 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00588Q9Y4M8 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
LINC00588Q9Y4M8 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC14.95□□□□□ -0.02
LINC00588Q9Y4M8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00588Q9Y4M8 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00588Q9Y4M8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00588Q9Y4M8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00588Q9Y4M8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC14.95□□□□□ -0.02
LINC00588Q9Y4M8 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00588Q9Y4M8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00588Q9Y4M8 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00588Q9Y4M8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC14.95□□□□□ -0.02
LINC00588Q9Y4M8 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00588Q9Y4M8 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00588Q9Y4M8 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC14.95□□□□□ -0.02
LINC00588Q9Y4M8 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00588Q9Y4M8 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
LINC00588Q9Y4M8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
LINC00588Q9Y4M8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00588Q9Y4M8 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00588Q9Y4M8 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00588Q9Y4M8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00588Q9Y4M8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00588Q9Y4M8 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
LINC00588Q9Y4M8 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00588Q9Y4M8 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00588Q9Y4M8 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC00588Q9Y4M8 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00588Q9Y4M8 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00588Q9Y4M8 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
LINC00588Q9Y4M8 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00588Q9Y4M8 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00588Q9Y4M8 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00588Q9Y4M8 TPRG1LP1-201ENST00000598702 760 ntBASIC14.94□□□□□ -0.02
LINC00588Q9Y4M8 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
LINC00588Q9Y4M8 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC14.94□□□□□ -0.02
LINC00588Q9Y4M8 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms