Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
KDM3AQ9Y4C1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
KDM3AQ9Y4C1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC24.62■■□□□ 1.53
KDM3AQ9Y4C1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
KDM3AQ9Y4C1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
KDM3AQ9Y4C1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
KDM3AQ9Y4C1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC24.62■■□□□ 1.53
KDM3AQ9Y4C1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC24.61■■□□□ 1.53
KDM3AQ9Y4C1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC24.61■■□□□ 1.53
KDM3AQ9Y4C1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
KDM3AQ9Y4C1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
KDM3AQ9Y4C1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
KDM3AQ9Y4C1 AC087742.1-201ENST00000575880 1738 ntBASIC24.61■■□□□ 1.53
KDM3AQ9Y4C1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
KDM3AQ9Y4C1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
KDM3AQ9Y4C1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
KDM3AQ9Y4C1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
KDM3AQ9Y4C1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC24.61■■□□□ 1.53
KDM3AQ9Y4C1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.61■■□□□ 1.53
KDM3AQ9Y4C1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.6■■□□□ 1.53
KDM3AQ9Y4C1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
KDM3AQ9Y4C1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
KDM3AQ9Y4C1 AC127496.7-201ENST00000625110 1798 ntBASIC24.6■■□□□ 1.53
KDM3AQ9Y4C1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
KDM3AQ9Y4C1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC24.6■■□□□ 1.53
KDM3AQ9Y4C1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC24.6■■□□□ 1.53
KDM3AQ9Y4C1 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC24.6■■□□□ 1.53
KDM3AQ9Y4C1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
KDM3AQ9Y4C1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
KDM3AQ9Y4C1 AL162430.1-201ENST00000480705 870 ntBASIC24.6■■□□□ 1.53
KDM3AQ9Y4C1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC24.6■■□□□ 1.53
KDM3AQ9Y4C1 AL031602.1-201ENST00000633169 911 ntBASIC24.6■■□□□ 1.53
KDM3AQ9Y4C1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
KDM3AQ9Y4C1 AC233723.2-201ENST00000623798 2106 ntBASIC24.59■■□□□ 1.53
KDM3AQ9Y4C1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
KDM3AQ9Y4C1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
KDM3AQ9Y4C1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
KDM3AQ9Y4C1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
KDM3AQ9Y4C1 SP2-202ENST00000613139 908 ntTSL 5 BASIC24.59■■□□□ 1.53
KDM3AQ9Y4C1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
KDM3AQ9Y4C1 TSPY26P-201ENST00000476365 1326 ntBASIC24.58■■□□□ 1.53
KDM3AQ9Y4C1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.53
KDM3AQ9Y4C1 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
KDM3AQ9Y4C1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC24.58■■□□□ 1.53
KDM3AQ9Y4C1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
KDM3AQ9Y4C1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.52
KDM3AQ9Y4C1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
KDM3AQ9Y4C1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC24.58■■□□□ 1.52
KDM3AQ9Y4C1 IGHV3-19-201ENST00000521488 291 ntBASIC24.58■■□□□ 1.52
KDM3AQ9Y4C1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC24.58■■□□□ 1.52
KDM3AQ9Y4C1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC24.58■■□□□ 1.52
KDM3AQ9Y4C1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
KDM3AQ9Y4C1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
KDM3AQ9Y4C1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
KDM3AQ9Y4C1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
KDM3AQ9Y4C1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
KDM3AQ9Y4C1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC24.57■■□□□ 1.52
KDM3AQ9Y4C1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
KDM3AQ9Y4C1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
KDM3AQ9Y4C1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC24.57■■□□□ 1.52
KDM3AQ9Y4C1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
KDM3AQ9Y4C1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
KDM3AQ9Y4C1 AC068587.7-201ENST00000641602 218 ntBASIC24.57■■□□□ 1.52
KDM3AQ9Y4C1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
KDM3AQ9Y4C1 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
KDM3AQ9Y4C1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
KDM3AQ9Y4C1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
KDM3AQ9Y4C1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
KDM3AQ9Y4C1 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
KDM3AQ9Y4C1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
KDM3AQ9Y4C1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC24.56■■□□□ 1.52
KDM3AQ9Y4C1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
KDM3AQ9Y4C1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
KDM3AQ9Y4C1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
KDM3AQ9Y4C1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC24.55■■□□□ 1.52
KDM3AQ9Y4C1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
KDM3AQ9Y4C1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
KDM3AQ9Y4C1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
KDM3AQ9Y4C1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
KDM3AQ9Y4C1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC24.55■■□□□ 1.52
KDM3AQ9Y4C1 AC010525.1-201ENST00000585559 441 ntBASIC24.55■■□□□ 1.52
KDM3AQ9Y4C1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC24.55■■□□□ 1.52
KDM3AQ9Y4C1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
KDM3AQ9Y4C1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC24.54■■□□□ 1.52
KDM3AQ9Y4C1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
KDM3AQ9Y4C1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
KDM3AQ9Y4C1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
KDM3AQ9Y4C1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
KDM3AQ9Y4C1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
KDM3AQ9Y4C1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
KDM3AQ9Y4C1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC24.54■■□□□ 1.52
KDM3AQ9Y4C1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
KDM3AQ9Y4C1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
KDM3AQ9Y4C1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC24.54■■□□□ 1.52
KDM3AQ9Y4C1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
KDM3AQ9Y4C1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
KDM3AQ9Y4C1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
KDM3AQ9Y4C1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
KDM3AQ9Y4C1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
KDM3AQ9Y4C1 MIR572-201ENST00000384983 95 ntBASIC24.53■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms