Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MRPS28Q9Y2Q9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.76■□□□□ 0.59
MRPS28Q9Y2Q9 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.76■□□□□ 0.59
MRPS28Q9Y2Q9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MRPS28Q9Y2Q9 AC004687.1-201ENST00000579003 1625 ntBASIC18.76■□□□□ 0.59
MRPS28Q9Y2Q9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.76■□□□□ 0.59
MRPS28Q9Y2Q9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.76■□□□□ 0.59
MRPS28Q9Y2Q9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.76■□□□□ 0.59
MRPS28Q9Y2Q9 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.76■□□□□ 0.59
MRPS28Q9Y2Q9 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.76■□□□□ 0.59
MRPS28Q9Y2Q9 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MRPS28Q9Y2Q9 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MRPS28Q9Y2Q9 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MRPS28Q9Y2Q9 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MRPS28Q9Y2Q9 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.76■□□□□ 0.59
MRPS28Q9Y2Q9 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
MRPS28Q9Y2Q9 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
MRPS28Q9Y2Q9 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MRPS28Q9Y2Q9 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MRPS28Q9Y2Q9 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
MRPS28Q9Y2Q9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
MRPS28Q9Y2Q9 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
MRPS28Q9Y2Q9 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
MRPS28Q9Y2Q9 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MRPS28Q9Y2Q9 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MRPS28Q9Y2Q9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.74■□□□□ 0.59
MRPS28Q9Y2Q9 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
MRPS28Q9Y2Q9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MRPS28Q9Y2Q9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.74■□□□□ 0.59
MRPS28Q9Y2Q9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MRPS28Q9Y2Q9 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MRPS28Q9Y2Q9 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.74■□□□□ 0.59
MRPS28Q9Y2Q9 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MRPS28Q9Y2Q9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.74■□□□□ 0.59
MRPS28Q9Y2Q9 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MRPS28Q9Y2Q9 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
MRPS28Q9Y2Q9 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MRPS28Q9Y2Q9 AC010542.4-201ENST00000563151 1910 ntBASIC18.74■□□□□ 0.59
MRPS28Q9Y2Q9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.73■□□□□ 0.59
MRPS28Q9Y2Q9 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MRPS28Q9Y2Q9 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MRPS28Q9Y2Q9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
MRPS28Q9Y2Q9 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MRPS28Q9Y2Q9 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MRPS28Q9Y2Q9 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MRPS28Q9Y2Q9 AC009102.2-201ENST00000606772 1639 ntBASIC18.73■□□□□ 0.59
MRPS28Q9Y2Q9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.73■□□□□ 0.59
MRPS28Q9Y2Q9 FAM99A-202ENST00000538190 1989 ntBASIC18.73■□□□□ 0.59
MRPS28Q9Y2Q9 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
MRPS28Q9Y2Q9 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.73■□□□□ 0.59
MRPS28Q9Y2Q9 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MRPS28Q9Y2Q9 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MRPS28Q9Y2Q9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MRPS28Q9Y2Q9 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.72■□□□□ 0.59
MRPS28Q9Y2Q9 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MRPS28Q9Y2Q9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MRPS28Q9Y2Q9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
MRPS28Q9Y2Q9 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MRPS28Q9Y2Q9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.72■□□□□ 0.59
MRPS28Q9Y2Q9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MRPS28Q9Y2Q9 AC092028.1-203ENST00000608262 953 ntBASIC18.72■□□□□ 0.59
MRPS28Q9Y2Q9 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MRPS28Q9Y2Q9 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MRPS28Q9Y2Q9 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
MRPS28Q9Y2Q9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
MRPS28Q9Y2Q9 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MRPS28Q9Y2Q9 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.71■□□□□ 0.59
MRPS28Q9Y2Q9 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MRPS28Q9Y2Q9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.71■□□□□ 0.59
MRPS28Q9Y2Q9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.71■□□□□ 0.59
MRPS28Q9Y2Q9 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.71■□□□□ 0.59
MRPS28Q9Y2Q9 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.71■□□□□ 0.59
MRPS28Q9Y2Q9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MRPS28Q9Y2Q9 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MRPS28Q9Y2Q9 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.71■□□□□ 0.59
MRPS28Q9Y2Q9 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
MRPS28Q9Y2Q9 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.71■□□□□ 0.59
MRPS28Q9Y2Q9 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MRPS28Q9Y2Q9 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
MRPS28Q9Y2Q9 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MRPS28Q9Y2Q9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MRPS28Q9Y2Q9 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.7■□□□□ 0.58
MRPS28Q9Y2Q9 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
MRPS28Q9Y2Q9 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.7■□□□□ 0.58
MRPS28Q9Y2Q9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.7■□□□□ 0.58
MRPS28Q9Y2Q9 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MRPS28Q9Y2Q9 KRT125P-201ENST00000546827 989 ntBASIC18.7■□□□□ 0.58
MRPS28Q9Y2Q9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
MRPS28Q9Y2Q9 MTDHP2-201ENST00000601468 714 ntBASIC18.7■□□□□ 0.58
MRPS28Q9Y2Q9 CA15P2-201ENST00000611168 834 ntBASIC18.7■□□□□ 0.58
MRPS28Q9Y2Q9 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MRPS28Q9Y2Q9 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MRPS28Q9Y2Q9 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MRPS28Q9Y2Q9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MRPS28Q9Y2Q9 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.7■□□□□ 0.58
MRPS28Q9Y2Q9 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MRPS28Q9Y2Q9 AC026310.3-201ENST00000625186 2373 ntBASIC18.69■□□□□ 0.58
MRPS28Q9Y2Q9 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MRPS28Q9Y2Q9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.69■□□□□ 0.58
MRPS28Q9Y2Q9 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms