Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.93■□□□□ 0.78
RPH3AQ9Y2J0 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RPH3AQ9Y2J0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPH3AQ9Y2J0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPH3AQ9Y2J0 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RPH3AQ9Y2J0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RPH3AQ9Y2J0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RPH3AQ9Y2J0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RPH3AQ9Y2J0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.92■□□□□ 0.78
RPH3AQ9Y2J0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.92■□□□□ 0.78
RPH3AQ9Y2J0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
RPH3AQ9Y2J0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPH3AQ9Y2J0 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.92■□□□□ 0.78
RPH3AQ9Y2J0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RPH3AQ9Y2J0 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.92■□□□□ 0.78
RPH3AQ9Y2J0 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
RPH3AQ9Y2J0 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPH3AQ9Y2J0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPH3AQ9Y2J0 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPH3AQ9Y2J0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPH3AQ9Y2J0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RPH3AQ9Y2J0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPH3AQ9Y2J0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RPH3AQ9Y2J0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RPH3AQ9Y2J0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPH3AQ9Y2J0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.91■□□□□ 0.78
RPH3AQ9Y2J0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPH3AQ9Y2J0 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.91■□□□□ 0.78
RPH3AQ9Y2J0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.91■□□□□ 0.78
RPH3AQ9Y2J0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPH3AQ9Y2J0 TSPY26P-201ENST00000476365 1326 ntBASIC19.91■□□□□ 0.78
RPH3AQ9Y2J0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
RPH3AQ9Y2J0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
RPH3AQ9Y2J0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RPH3AQ9Y2J0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
RPH3AQ9Y2J0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
RPH3AQ9Y2J0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
RPH3AQ9Y2J0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.91■□□□□ 0.78
RPH3AQ9Y2J0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RPH3AQ9Y2J0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPH3AQ9Y2J0 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPH3AQ9Y2J0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.9■□□□□ 0.78
RPH3AQ9Y2J0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.9■□□□□ 0.78
RPH3AQ9Y2J0 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPH3AQ9Y2J0 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RPH3AQ9Y2J0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPH3AQ9Y2J0 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPH3AQ9Y2J0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RPH3AQ9Y2J0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.9■□□□□ 0.78
RPH3AQ9Y2J0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPH3AQ9Y2J0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
RPH3AQ9Y2J0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.9■□□□□ 0.78
RPH3AQ9Y2J0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
RPH3AQ9Y2J0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
RPH3AQ9Y2J0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RPH3AQ9Y2J0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.89■□□□□ 0.77
RPH3AQ9Y2J0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RPH3AQ9Y2J0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.89■□□□□ 0.77
RPH3AQ9Y2J0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.89■□□□□ 0.77
RPH3AQ9Y2J0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.89■□□□□ 0.77
RPH3AQ9Y2J0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPH3AQ9Y2J0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.88■□□□□ 0.77
RPH3AQ9Y2J0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPH3AQ9Y2J0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
RPH3AQ9Y2J0 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
RPH3AQ9Y2J0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RPH3AQ9Y2J0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.88■□□□□ 0.77
RPH3AQ9Y2J0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.88■□□□□ 0.77
RPH3AQ9Y2J0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
RPH3AQ9Y2J0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RPH3AQ9Y2J0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.88■□□□□ 0.77
RPH3AQ9Y2J0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.88■□□□□ 0.77
RPH3AQ9Y2J0 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPH3AQ9Y2J0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPH3AQ9Y2J0 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
RPH3AQ9Y2J0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPH3AQ9Y2J0 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPH3AQ9Y2J0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPH3AQ9Y2J0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPH3AQ9Y2J0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.87■□□□□ 0.77
RPH3AQ9Y2J0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RPH3AQ9Y2J0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RPH3AQ9Y2J0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPH3AQ9Y2J0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPH3AQ9Y2J0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPH3AQ9Y2J0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.87■□□□□ 0.77
RPH3AQ9Y2J0 IGHV3-19-201ENST00000521488 291 ntBASIC19.87■□□□□ 0.77
RPH3AQ9Y2J0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.87■□□□□ 0.77
RPH3AQ9Y2J0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RPH3AQ9Y2J0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RPH3AQ9Y2J0 MIR6821-201ENST00000617625 74 ntBASIC19.87■□□□□ 0.77
RPH3AQ9Y2J0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPH3AQ9Y2J0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RPH3AQ9Y2J0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPH3AQ9Y2J0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPH3AQ9Y2J0 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RPH3AQ9Y2J0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPH3AQ9Y2J0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPH3AQ9Y2J0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPH3AQ9Y2J0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms