Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 HLA-L-211ENST00000482052 1765 ntBASIC26.72■■□□□ 1.87
ZC3H4Q9UPT8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
ZC3H4Q9UPT8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.72■■□□□ 1.87
ZC3H4Q9UPT8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ZC3H4Q9UPT8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.72■■□□□ 1.87
ZC3H4Q9UPT8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ZC3H4Q9UPT8 RHEB-204ENST00000472642 900 ntTSL 3 BASIC26.71■■□□□ 1.87
ZC3H4Q9UPT8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC26.71■■□□□ 1.87
ZC3H4Q9UPT8 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC26.71■■□□□ 1.87
ZC3H4Q9UPT8 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
ZC3H4Q9UPT8 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.87
ZC3H4Q9UPT8 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
ZC3H4Q9UPT8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
ZC3H4Q9UPT8 APTR-203ENST00000430801 583 ntTSL 5 BASIC26.7■■□□□ 1.87
ZC3H4Q9UPT8 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
ZC3H4Q9UPT8 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
ZC3H4Q9UPT8 AC092803.2-201ENST00000564287 1899 ntBASIC26.7■■□□□ 1.86
ZC3H4Q9UPT8 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
ZC3H4Q9UPT8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
ZC3H4Q9UPT8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
ZC3H4Q9UPT8 DUSP5P2-201ENST00000426873 1033 ntBASIC26.69■■□□□ 1.86
ZC3H4Q9UPT8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC26.69■■□□□ 1.86
ZC3H4Q9UPT8 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
ZC3H4Q9UPT8 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
ZC3H4Q9UPT8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
ZC3H4Q9UPT8 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
ZC3H4Q9UPT8 AC010141.3-201ENST00000456659 717 ntBASIC26.68■■□□□ 1.86
ZC3H4Q9UPT8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
ZC3H4Q9UPT8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.68■■□□□ 1.86
ZC3H4Q9UPT8 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
ZC3H4Q9UPT8 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC26.68■■□□□ 1.86
ZC3H4Q9UPT8 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
ZC3H4Q9UPT8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC26.68■■□□□ 1.86
ZC3H4Q9UPT8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
ZC3H4Q9UPT8 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC26.68■■□□□ 1.86
ZC3H4Q9UPT8 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
ZC3H4Q9UPT8 SLC7A5P1-201ENST00000568957 537 ntBASIC26.67■■□□□ 1.86
ZC3H4Q9UPT8 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
ZC3H4Q9UPT8 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
ZC3H4Q9UPT8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
ZC3H4Q9UPT8 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
ZC3H4Q9UPT8 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
ZC3H4Q9UPT8 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
ZC3H4Q9UPT8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
ZC3H4Q9UPT8 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC26.66■■□□□ 1.86
ZC3H4Q9UPT8 BAALC-201ENST00000297574 801 ntTSL 3 BASIC26.65■■□□□ 1.86
ZC3H4Q9UPT8 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
ZC3H4Q9UPT8 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
ZC3H4Q9UPT8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC26.65■■□□□ 1.86
ZC3H4Q9UPT8 AL596275.1-201ENST00000423464 877 ntBASIC26.65■■□□□ 1.86
ZC3H4Q9UPT8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
ZC3H4Q9UPT8 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC26.65■■□□□ 1.86
ZC3H4Q9UPT8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC26.65■■□□□ 1.86
ZC3H4Q9UPT8 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
ZC3H4Q9UPT8 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
ZC3H4Q9UPT8 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC26.65■■□□□ 1.86
ZC3H4Q9UPT8 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
ZC3H4Q9UPT8 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
ZC3H4Q9UPT8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
ZC3H4Q9UPT8 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC26.65■■□□□ 1.86
ZC3H4Q9UPT8 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC26.65■■□□□ 1.86
ZC3H4Q9UPT8 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC26.65■■□□□ 1.86
ZC3H4Q9UPT8 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC26.65■■□□□ 1.86
ZC3H4Q9UPT8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
ZC3H4Q9UPT8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
ZC3H4Q9UPT8 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.64■■□□□ 1.86
ZC3H4Q9UPT8 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.85
ZC3H4Q9UPT8 PPP1R14BP2-201ENST00000426284 444 ntBASIC26.64■■□□□ 1.85
ZC3H4Q9UPT8 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC26.64■■□□□ 1.85
ZC3H4Q9UPT8 ADM-205ENST00000528544 586 ntTSL 2 BASIC26.64■■□□□ 1.85
ZC3H4Q9UPT8 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
ZC3H4Q9UPT8 EI24-211ENST00000534546 1544 ntTSL 2 BASIC26.63■■□□□ 1.85
ZC3H4Q9UPT8 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
ZC3H4Q9UPT8 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
ZC3H4Q9UPT8 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
ZC3H4Q9UPT8 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
ZC3H4Q9UPT8 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
ZC3H4Q9UPT8 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
ZC3H4Q9UPT8 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC26.62■■□□□ 1.85
ZC3H4Q9UPT8 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
ZC3H4Q9UPT8 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
ZC3H4Q9UPT8 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
ZC3H4Q9UPT8 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC26.62■■□□□ 1.85
ZC3H4Q9UPT8 RARRES2P4-201ENST00000514074 484 ntBASIC26.62■■□□□ 1.85
ZC3H4Q9UPT8 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
ZC3H4Q9UPT8 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
ZC3H4Q9UPT8 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC26.61■■□□□ 1.85
ZC3H4Q9UPT8 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
ZC3H4Q9UPT8 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC26.61■■□□□ 1.85
ZC3H4Q9UPT8 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
ZC3H4Q9UPT8 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
ZC3H4Q9UPT8 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
ZC3H4Q9UPT8 RPS2P4-201ENST00000476944 856 ntBASIC26.61■■□□□ 1.85
ZC3H4Q9UPT8 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
ZC3H4Q9UPT8 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC26.61■■□□□ 1.85
ZC3H4Q9UPT8 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC26.61■■□□□ 1.85
ZC3H4Q9UPT8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC26.61■■□□□ 1.85
ZC3H4Q9UPT8 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
ZC3H4Q9UPT8 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC26.6■■□□□ 1.85
ZC3H4Q9UPT8 AC005224.4-201ENST00000583262 1652 ntBASIC26.6■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms