Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CNOT11Q9UKZ1 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNOT11Q9UKZ1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNOT11Q9UKZ1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNOT11Q9UKZ1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CNOT11Q9UKZ1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNOT11Q9UKZ1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.91■□□□□ 0.94
CNOT11Q9UKZ1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.91■□□□□ 0.94
CNOT11Q9UKZ1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.91■□□□□ 0.94
CNOT11Q9UKZ1 AL512631.2-201ENST00000604634 923 ntBASIC20.91■□□□□ 0.94
CNOT11Q9UKZ1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CNOT11Q9UKZ1 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNOT11Q9UKZ1 AC079630.1-202ENST00000618127 1840 ntBASIC20.91■□□□□ 0.94
CNOT11Q9UKZ1 AC008406.3-201ENST00000620001 1374 ntBASIC20.91■□□□□ 0.94
CNOT11Q9UKZ1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.91■□□□□ 0.94
CNOT11Q9UKZ1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNOT11Q9UKZ1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNOT11Q9UKZ1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNOT11Q9UKZ1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CNOT11Q9UKZ1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.9■□□□□ 0.94
CNOT11Q9UKZ1 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.9■□□□□ 0.94
CNOT11Q9UKZ1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNOT11Q9UKZ1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNOT11Q9UKZ1 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CNOT11Q9UKZ1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNOT11Q9UKZ1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CNOT11Q9UKZ1 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.89■□□□□ 0.94
CNOT11Q9UKZ1 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CNOT11Q9UKZ1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.89■□□□□ 0.94
CNOT11Q9UKZ1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CNOT11Q9UKZ1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CNOT11Q9UKZ1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNOT11Q9UKZ1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CNOT11Q9UKZ1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNOT11Q9UKZ1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNOT11Q9UKZ1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CNOT11Q9UKZ1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CNOT11Q9UKZ1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNOT11Q9UKZ1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.89■□□□□ 0.93
CNOT11Q9UKZ1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CNOT11Q9UKZ1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.89■□□□□ 0.93
CNOT11Q9UKZ1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CNOT11Q9UKZ1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CNOT11Q9UKZ1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.89■□□□□ 0.93
CNOT11Q9UKZ1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.89■□□□□ 0.93
CNOT11Q9UKZ1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNOT11Q9UKZ1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CNOT11Q9UKZ1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNOT11Q9UKZ1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNOT11Q9UKZ1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.88■□□□□ 0.93
CNOT11Q9UKZ1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNOT11Q9UKZ1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNOT11Q9UKZ1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CNOT11Q9UKZ1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.88■□□□□ 0.93
CNOT11Q9UKZ1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNOT11Q9UKZ1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNOT11Q9UKZ1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNOT11Q9UKZ1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNOT11Q9UKZ1 MIR4466-201ENST00000606121 54 ntBASIC20.88■□□□□ 0.93
CNOT11Q9UKZ1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNOT11Q9UKZ1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNOT11Q9UKZ1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CNOT11Q9UKZ1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNOT11Q9UKZ1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNOT11Q9UKZ1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.87■□□□□ 0.93
CNOT11Q9UKZ1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CNOT11Q9UKZ1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.87■□□□□ 0.93
CNOT11Q9UKZ1 ALDH1A3-203ENST00000557963 1670 ntBASIC20.87■□□□□ 0.93
CNOT11Q9UKZ1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.87■□□□□ 0.93
CNOT11Q9UKZ1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNOT11Q9UKZ1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNOT11Q9UKZ1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.87■□□□□ 0.93
CNOT11Q9UKZ1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNOT11Q9UKZ1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CNOT11Q9UKZ1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNOT11Q9UKZ1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNOT11Q9UKZ1 AC080038.3-201ENST00000623346 1952 ntBASIC20.86■□□□□ 0.93
CNOT11Q9UKZ1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNOT11Q9UKZ1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CNOT11Q9UKZ1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.86■□□□□ 0.93
CNOT11Q9UKZ1 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNOT11Q9UKZ1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNOT11Q9UKZ1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.86■□□□□ 0.93
CNOT11Q9UKZ1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNOT11Q9UKZ1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CNOT11Q9UKZ1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.86■□□□□ 0.93
CNOT11Q9UKZ1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CNOT11Q9UKZ1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.86■□□□□ 0.93
CNOT11Q9UKZ1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CNOT11Q9UKZ1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CNOT11Q9UKZ1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.86■□□□□ 0.93
CNOT11Q9UKZ1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CNOT11Q9UKZ1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNOT11Q9UKZ1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNOT11Q9UKZ1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.86■□□□□ 0.93
CNOT11Q9UKZ1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.86■□□□□ 0.93
CNOT11Q9UKZ1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNOT11Q9UKZ1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
CNOT11Q9UKZ1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CNOT11Q9UKZ1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms