Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCF1Q9UBD9 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.45■□□□□ 0.7
CLCF1Q9UBD9 KRT18P14-201ENST00000534205 1250 ntBASIC19.45■□□□□ 0.7
CLCF1Q9UBD9 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.45■□□□□ 0.7
CLCF1Q9UBD9 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCF1Q9UBD9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.45■□□□□ 0.7
CLCF1Q9UBD9 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
CLCF1Q9UBD9 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CLCF1Q9UBD9 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CLCF1Q9UBD9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.44■□□□□ 0.7
CLCF1Q9UBD9 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLCF1Q9UBD9 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLCF1Q9UBD9 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCF1Q9UBD9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.44■□□□□ 0.7
CLCF1Q9UBD9 KRT18P5-201ENST00000436075 1291 ntBASIC19.44■□□□□ 0.7
CLCF1Q9UBD9 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.44■□□□□ 0.7
CLCF1Q9UBD9 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.44■□□□□ 0.7
CLCF1Q9UBD9 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.44■□□□□ 0.7
CLCF1Q9UBD9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.44■□□□□ 0.7
CLCF1Q9UBD9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.44■□□□□ 0.7
CLCF1Q9UBD9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCF1Q9UBD9 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCF1Q9UBD9 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLCF1Q9UBD9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCF1Q9UBD9 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCF1Q9UBD9 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLCF1Q9UBD9 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
CLCF1Q9UBD9 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CLCF1Q9UBD9 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CLCF1Q9UBD9 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.43■□□□□ 0.7
CLCF1Q9UBD9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CLCF1Q9UBD9 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.43■□□□□ 0.7
CLCF1Q9UBD9 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.43■□□□□ 0.7
CLCF1Q9UBD9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CLCF1Q9UBD9 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLCF1Q9UBD9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.43■□□□□ 0.7
CLCF1Q9UBD9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCF1Q9UBD9 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.43■□□□□ 0.7
CLCF1Q9UBD9 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.42■□□□□ 0.7
CLCF1Q9UBD9 BX005040.4-201ENST00000637145 1518 ntBASIC19.42■□□□□ 0.7
CLCF1Q9UBD9 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLCF1Q9UBD9 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.42■□□□□ 0.7
CLCF1Q9UBD9 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCF1Q9UBD9 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCF1Q9UBD9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCF1Q9UBD9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLCF1Q9UBD9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCF1Q9UBD9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.42■□□□□ 0.7
CLCF1Q9UBD9 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.42■□□□□ 0.7
CLCF1Q9UBD9 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.42■□□□□ 0.7
CLCF1Q9UBD9 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCF1Q9UBD9 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCF1Q9UBD9 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.42■□□□□ 0.7
CLCF1Q9UBD9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCF1Q9UBD9 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCF1Q9UBD9 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCF1Q9UBD9 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.41■□□□□ 0.7
CLCF1Q9UBD9 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CLCF1Q9UBD9 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.41■□□□□ 0.7
CLCF1Q9UBD9 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCF1Q9UBD9 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.41■□□□□ 0.7
CLCF1Q9UBD9 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCF1Q9UBD9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCF1Q9UBD9 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCF1Q9UBD9 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCF1Q9UBD9 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCF1Q9UBD9 LINC01960-201ENST00000563759 1884 ntBASIC19.41■□□□□ 0.7
CLCF1Q9UBD9 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCF1Q9UBD9 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCF1Q9UBD9 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCF1Q9UBD9 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCF1Q9UBD9 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLCF1Q9UBD9 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLCF1Q9UBD9 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLCF1Q9UBD9 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLCF1Q9UBD9 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.4■□□□□ 0.7
CLCF1Q9UBD9 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLCF1Q9UBD9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CLCF1Q9UBD9 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCF1Q9UBD9 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCF1Q9UBD9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.39■□□□□ 0.7
CLCF1Q9UBD9 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CLCF1Q9UBD9 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCF1Q9UBD9 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CLCF1Q9UBD9 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCF1Q9UBD9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLCF1Q9UBD9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLCF1Q9UBD9 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCF1Q9UBD9 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCF1Q9UBD9 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
CLCF1Q9UBD9 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CLCF1Q9UBD9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLCF1Q9UBD9 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.38■□□□□ 0.69
CLCF1Q9UBD9 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CLCF1Q9UBD9 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLCF1Q9UBD9 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
CLCF1Q9UBD9 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.38■□□□□ 0.69
CLCF1Q9UBD9 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.38■□□□□ 0.69
CLCF1Q9UBD9 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.37■□□□□ 0.69
CLCF1Q9UBD9 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms