Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.06■□□□□ 0.96
SPHK1Q9NYA1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPHK1Q9NYA1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SPHK1Q9NYA1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.06■□□□□ 0.96
SPHK1Q9NYA1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SPHK1Q9NYA1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SPHK1Q9NYA1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.06■□□□□ 0.96
SPHK1Q9NYA1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.06■□□□□ 0.96
SPHK1Q9NYA1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.06■□□□□ 0.96
SPHK1Q9NYA1 AC087239.1-201ENST00000622671 572 ntBASIC21.06■□□□□ 0.96
SPHK1Q9NYA1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPHK1Q9NYA1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPHK1Q9NYA1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPHK1Q9NYA1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
SPHK1Q9NYA1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
SPHK1Q9NYA1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SPHK1Q9NYA1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SPHK1Q9NYA1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPHK1Q9NYA1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPHK1Q9NYA1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.05■□□□□ 0.96
SPHK1Q9NYA1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPHK1Q9NYA1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.05■□□□□ 0.96
SPHK1Q9NYA1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPHK1Q9NYA1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPHK1Q9NYA1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.05■□□□□ 0.96
SPHK1Q9NYA1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SPHK1Q9NYA1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPHK1Q9NYA1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPHK1Q9NYA1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SPHK1Q9NYA1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPHK1Q9NYA1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.04■□□□□ 0.96
SPHK1Q9NYA1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.04■□□□□ 0.96
SPHK1Q9NYA1 MIR6084-201ENST00000622012 110 ntBASIC21.04■□□□□ 0.96
SPHK1Q9NYA1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPHK1Q9NYA1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.04■□□□□ 0.96
SPHK1Q9NYA1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPHK1Q9NYA1 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SPHK1Q9NYA1 OXCT2P1-201ENST00000447263 1535 ntBASIC21.04■□□□□ 0.96
SPHK1Q9NYA1 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPHK1Q9NYA1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPHK1Q9NYA1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.03■□□□□ 0.96
SPHK1Q9NYA1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPHK1Q9NYA1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.03■□□□□ 0.96
SPHK1Q9NYA1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.03■□□□□ 0.96
SPHK1Q9NYA1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SPHK1Q9NYA1 AC105233.4-201ENST00000642045 216 ntBASIC21.03■□□□□ 0.96
SPHK1Q9NYA1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPHK1Q9NYA1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SPHK1Q9NYA1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPHK1Q9NYA1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
SPHK1Q9NYA1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SPHK1Q9NYA1 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPHK1Q9NYA1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.03■□□□□ 0.96
SPHK1Q9NYA1 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPHK1Q9NYA1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.03■□□□□ 0.96
SPHK1Q9NYA1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPHK1Q9NYA1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPHK1Q9NYA1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
SPHK1Q9NYA1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SPHK1Q9NYA1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPHK1Q9NYA1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPHK1Q9NYA1 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.02■□□□□ 0.96
SPHK1Q9NYA1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.02■□□□□ 0.96
SPHK1Q9NYA1 AC012414.1-201ENST00000556676 535 ntBASIC21.02■□□□□ 0.96
SPHK1Q9NYA1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.02■□□□□ 0.96
SPHK1Q9NYA1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPHK1Q9NYA1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SPHK1Q9NYA1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPHK1Q9NYA1 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SPHK1Q9NYA1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPHK1Q9NYA1 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SPHK1Q9NYA1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPHK1Q9NYA1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPHK1Q9NYA1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SPHK1Q9NYA1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SPHK1Q9NYA1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.01■□□□□ 0.95
SPHK1Q9NYA1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.01■□□□□ 0.95
SPHK1Q9NYA1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SPHK1Q9NYA1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.01■□□□□ 0.95
SPHK1Q9NYA1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.01■□□□□ 0.95
SPHK1Q9NYA1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPHK1Q9NYA1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21■□□□□ 0.95
SPHK1Q9NYA1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SPHK1Q9NYA1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21■□□□□ 0.95
SPHK1Q9NYA1 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPHK1Q9NYA1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SPHK1Q9NYA1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21■□□□□ 0.95
SPHK1Q9NYA1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21■□□□□ 0.95
SPHK1Q9NYA1 RARRES2P6-201ENST00000567333 442 ntBASIC21■□□□□ 0.95
SPHK1Q9NYA1 SP2-202ENST00000613139 908 ntTSL 5 BASIC21■□□□□ 0.95
SPHK1Q9NYA1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21■□□□□ 0.95
SPHK1Q9NYA1 AL358852.1-201ENST00000623174 1268 ntBASIC21■□□□□ 0.95
SPHK1Q9NYA1 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPHK1Q9NYA1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21■□□□□ 0.95
SPHK1Q9NYA1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SPHK1Q9NYA1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
SPHK1Q9NYA1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPHK1Q9NYA1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21■□□□□ 0.95
SPHK1Q9NYA1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPHK1Q9NYA1 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms