Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB16Q9NRJ7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB16Q9NRJ7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB16Q9NRJ7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB16Q9NRJ7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHB16Q9NRJ7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHB16Q9NRJ7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB16Q9NRJ7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PCDHB16Q9NRJ7 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB16Q9NRJ7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB16Q9NRJ7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB16Q9NRJ7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.84■□□□□ 0.61
PCDHB16Q9NRJ7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.84■□□□□ 0.61
PCDHB16Q9NRJ7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB16Q9NRJ7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB16Q9NRJ7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB16Q9NRJ7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB16Q9NRJ7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
PCDHB16Q9NRJ7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHB16Q9NRJ7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.83■□□□□ 0.6
PCDHB16Q9NRJ7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB16Q9NRJ7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB16Q9NRJ7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB16Q9NRJ7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PCDHB16Q9NRJ7 AC092053.2-201ENST00000640557 1818 ntBASIC18.83■□□□□ 0.6
PCDHB16Q9NRJ7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB16Q9NRJ7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
PCDHB16Q9NRJ7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB16Q9NRJ7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB16Q9NRJ7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHB16Q9NRJ7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB16Q9NRJ7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB16Q9NRJ7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHB16Q9NRJ7 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.82■□□□□ 0.6
PCDHB16Q9NRJ7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHB16Q9NRJ7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB16Q9NRJ7 RARRES2P1-201ENST00000474487 481 ntBASIC18.82■□□□□ 0.6
PCDHB16Q9NRJ7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB16Q9NRJ7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PCDHB16Q9NRJ7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB16Q9NRJ7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHB16Q9NRJ7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB16Q9NRJ7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB16Q9NRJ7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PCDHB16Q9NRJ7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB16Q9NRJ7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB16Q9NRJ7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB16Q9NRJ7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHB16Q9NRJ7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB16Q9NRJ7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB16Q9NRJ7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PCDHB16Q9NRJ7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB16Q9NRJ7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB16Q9NRJ7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB16Q9NRJ7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PCDHB16Q9NRJ7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB16Q9NRJ7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHB16Q9NRJ7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB16Q9NRJ7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHB16Q9NRJ7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDHB16Q9NRJ7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB16Q9NRJ7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHB16Q9NRJ7 KRT125P-201ENST00000546827 989 ntBASIC18.81■□□□□ 0.6
PCDHB16Q9NRJ7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB16Q9NRJ7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB16Q9NRJ7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB16Q9NRJ7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHB16Q9NRJ7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
PCDHB16Q9NRJ7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
PCDHB16Q9NRJ7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PCDHB16Q9NRJ7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHB16Q9NRJ7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHB16Q9NRJ7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDHB16Q9NRJ7 DUX4L4-201ENST00000566884 1269 ntBASIC18.8■□□□□ 0.6
PCDHB16Q9NRJ7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PCDHB16Q9NRJ7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB16Q9NRJ7 AL137060.1-201ENST00000618151 2648 ntBASIC18.8■□□□□ 0.6
PCDHB16Q9NRJ7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB16Q9NRJ7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB16Q9NRJ7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB16Q9NRJ7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB16Q9NRJ7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB16Q9NRJ7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB16Q9NRJ7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PCDHB16Q9NRJ7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB16Q9NRJ7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PCDHB16Q9NRJ7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB16Q9NRJ7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PCDHB16Q9NRJ7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHB16Q9NRJ7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB16Q9NRJ7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PCDHB16Q9NRJ7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB16Q9NRJ7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB16Q9NRJ7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB16Q9NRJ7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB16Q9NRJ7 Z92544.1-202ENST00000571933 1220 ntBASIC18.78■□□□□ 0.6
PCDHB16Q9NRJ7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHB16Q9NRJ7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PCDHB16Q9NRJ7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHB16Q9NRJ7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms