Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TM9SF3Q9HD45 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TM9SF3Q9HD45 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TM9SF3Q9HD45 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.86■■□□□ 1.09
TM9SF3Q9HD45 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
TM9SF3Q9HD45 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
TM9SF3Q9HD45 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TM9SF3Q9HD45 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.86■■□□□ 1.09
TM9SF3Q9HD45 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TM9SF3Q9HD45 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TM9SF3Q9HD45 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
TM9SF3Q9HD45 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.85■■□□□ 1.09
TM9SF3Q9HD45 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.85■■□□□ 1.09
TM9SF3Q9HD45 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TM9SF3Q9HD45 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
TM9SF3Q9HD45 ID1-201ENST00000376105 1233 ntBASIC21.85■■□□□ 1.09
TM9SF3Q9HD45 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.85■■□□□ 1.09
TM9SF3Q9HD45 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.84■■□□□ 1.09
TM9SF3Q9HD45 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TM9SF3Q9HD45 AC004812.2-201ENST00000611079 2094 ntBASIC21.84■■□□□ 1.09
TM9SF3Q9HD45 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
TM9SF3Q9HD45 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
TM9SF3Q9HD45 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.84■■□□□ 1.09
TM9SF3Q9HD45 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TM9SF3Q9HD45 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.84■■□□□ 1.09
TM9SF3Q9HD45 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.84■■□□□ 1.09
TM9SF3Q9HD45 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TM9SF3Q9HD45 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TM9SF3Q9HD45 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TM9SF3Q9HD45 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
TM9SF3Q9HD45 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TM9SF3Q9HD45 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
TM9SF3Q9HD45 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.83■■□□□ 1.09
TM9SF3Q9HD45 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.83■■□□□ 1.09
TM9SF3Q9HD45 KRT18P61-201ENST00000585825 1298 ntBASIC21.83■■□□□ 1.09
TM9SF3Q9HD45 TPRG1LP1-201ENST00000598702 760 ntBASIC21.83■■□□□ 1.09
TM9SF3Q9HD45 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.83■■□□□ 1.09
TM9SF3Q9HD45 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TM9SF3Q9HD45 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
TM9SF3Q9HD45 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
TM9SF3Q9HD45 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TM9SF3Q9HD45 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TM9SF3Q9HD45 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.82■■□□□ 1.08
TM9SF3Q9HD45 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TM9SF3Q9HD45 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TM9SF3Q9HD45 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TM9SF3Q9HD45 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TM9SF3Q9HD45 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TM9SF3Q9HD45 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.82■■□□□ 1.08
TM9SF3Q9HD45 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.82■■□□□ 1.08
TM9SF3Q9HD45 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.82■■□□□ 1.08
TM9SF3Q9HD45 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
TM9SF3Q9HD45 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TM9SF3Q9HD45 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TM9SF3Q9HD45 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
TM9SF3Q9HD45 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TM9SF3Q9HD45 AC004687.1-201ENST00000579003 1625 ntBASIC21.81■■□□□ 1.08
TM9SF3Q9HD45 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
TM9SF3Q9HD45 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TM9SF3Q9HD45 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TM9SF3Q9HD45 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TM9SF3Q9HD45 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.81■■□□□ 1.08
TM9SF3Q9HD45 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.81■■□□□ 1.08
TM9SF3Q9HD45 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.81■■□□□ 1.08
TM9SF3Q9HD45 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.81■■□□□ 1.08
TM9SF3Q9HD45 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
TM9SF3Q9HD45 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
TM9SF3Q9HD45 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
TM9SF3Q9HD45 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.81■■□□□ 1.08
TM9SF3Q9HD45 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TM9SF3Q9HD45 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.81■■□□□ 1.08
TM9SF3Q9HD45 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TM9SF3Q9HD45 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
TM9SF3Q9HD45 AC079630.1-202ENST00000618127 1840 ntBASIC21.8■■□□□ 1.08
TM9SF3Q9HD45 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.8■■□□□ 1.08
TM9SF3Q9HD45 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TM9SF3Q9HD45 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TM9SF3Q9HD45 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
TM9SF3Q9HD45 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TM9SF3Q9HD45 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.8■■□□□ 1.08
TM9SF3Q9HD45 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
TM9SF3Q9HD45 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.8■■□□□ 1.08
TM9SF3Q9HD45 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.8■■□□□ 1.08
TM9SF3Q9HD45 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.8■■□□□ 1.08
TM9SF3Q9HD45 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
TM9SF3Q9HD45 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.8■■□□□ 1.08
TM9SF3Q9HD45 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TM9SF3Q9HD45 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TM9SF3Q9HD45 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
TM9SF3Q9HD45 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.79■■□□□ 1.08
TM9SF3Q9HD45 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TM9SF3Q9HD45 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
TM9SF3Q9HD45 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TM9SF3Q9HD45 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.79■■□□□ 1.08
TM9SF3Q9HD45 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.79■■□□□ 1.08
TM9SF3Q9HD45 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.79■■□□□ 1.08
TM9SF3Q9HD45 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.79■■□□□ 1.08
TM9SF3Q9HD45 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.79■■□□□ 1.08
TM9SF3Q9HD45 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TM9SF3Q9HD45 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms