Protein–RNA interactions for Protein: Q96RT7

TUBGCP6, Gamma-tubulin complex component 6, humanhuman

Predictions only

Length 1,819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP6Q96RT7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
TUBGCP6Q96RT7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
TUBGCP6Q96RT7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
TUBGCP6Q96RT7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC28.33■■■□□ 2.13
TUBGCP6Q96RT7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
TUBGCP6Q96RT7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
TUBGCP6Q96RT7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC28.32■■■□□ 2.12
TUBGCP6Q96RT7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC28.32■■■□□ 2.12
TUBGCP6Q96RT7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
TUBGCP6Q96RT7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
TUBGCP6Q96RT7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
TUBGCP6Q96RT7 TSPY6P-201ENST00000448518 926 ntBASIC28.32■■■□□ 2.12
TUBGCP6Q96RT7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC28.32■■■□□ 2.12
TUBGCP6Q96RT7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC28.31■■■□□ 2.12
TUBGCP6Q96RT7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC28.31■■■□□ 2.12
TUBGCP6Q96RT7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC28.31■■■□□ 2.12
TUBGCP6Q96RT7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
TUBGCP6Q96RT7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC28.31■■■□□ 2.12
TUBGCP6Q96RT7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
TUBGCP6Q96RT7 AL121832.2-201ENST00000610979 668 ntBASIC28.31■■■□□ 2.12
TUBGCP6Q96RT7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TUBGCP6Q96RT7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC28.3■■■□□ 2.12
TUBGCP6Q96RT7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
TUBGCP6Q96RT7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC28.3■■■□□ 2.12
TUBGCP6Q96RT7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
TUBGCP6Q96RT7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC28.3■■■□□ 2.12
TUBGCP6Q96RT7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC28.3■■■□□ 2.12
TUBGCP6Q96RT7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
TUBGCP6Q96RT7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC28.29■■■□□ 2.12
TUBGCP6Q96RT7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC28.29■■■□□ 2.12
TUBGCP6Q96RT7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
TUBGCP6Q96RT7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
TUBGCP6Q96RT7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
TUBGCP6Q96RT7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
TUBGCP6Q96RT7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC28.29■■■□□ 2.12
TUBGCP6Q96RT7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
TUBGCP6Q96RT7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
TUBGCP6Q96RT7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC28.29■■■□□ 2.12
TUBGCP6Q96RT7 DUX4L16-201ENST00000555130 1264 ntBASIC28.29■■■□□ 2.12
TUBGCP6Q96RT7 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC28.29■■■□□ 2.12
TUBGCP6Q96RT7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
TUBGCP6Q96RT7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
TUBGCP6Q96RT7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
TUBGCP6Q96RT7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
TUBGCP6Q96RT7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC28.28■■■□□ 2.12
TUBGCP6Q96RT7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC28.28■■■□□ 2.12
TUBGCP6Q96RT7 ABCB10P4-201ENST00000566803 2184 ntBASIC28.28■■■□□ 2.12
TUBGCP6Q96RT7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
TUBGCP6Q96RT7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC28.28■■■□□ 2.12
TUBGCP6Q96RT7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC28.28■■■□□ 2.12
TUBGCP6Q96RT7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC28.28■■■□□ 2.12
TUBGCP6Q96RT7 AC008687.6-201ENST00000596318 630 ntBASIC28.28■■■□□ 2.12
TUBGCP6Q96RT7 BX005040.4-201ENST00000637145 1518 ntBASIC28.28■■■□□ 2.12
TUBGCP6Q96RT7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
TUBGCP6Q96RT7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
TUBGCP6Q96RT7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
TUBGCP6Q96RT7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC28.27■■■□□ 2.12
TUBGCP6Q96RT7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC28.27■■■□□ 2.12
TUBGCP6Q96RT7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC28.27■■■□□ 2.12
TUBGCP6Q96RT7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
TUBGCP6Q96RT7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
TUBGCP6Q96RT7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
TUBGCP6Q96RT7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
TUBGCP6Q96RT7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
TUBGCP6Q96RT7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC28.27■■■□□ 2.12
TUBGCP6Q96RT7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC28.27■■■□□ 2.12
TUBGCP6Q96RT7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
TUBGCP6Q96RT7 UBE2DNL-204ENST00000602536 740 ntBASIC28.27■■■□□ 2.12
TUBGCP6Q96RT7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC28.26■■■□□ 2.11
TUBGCP6Q96RT7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
TUBGCP6Q96RT7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
TUBGCP6Q96RT7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
TUBGCP6Q96RT7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
TUBGCP6Q96RT7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC28.26■■■□□ 2.11
TUBGCP6Q96RT7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
TUBGCP6Q96RT7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
TUBGCP6Q96RT7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC28.25■■■□□ 2.11
TUBGCP6Q96RT7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
TUBGCP6Q96RT7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC28.25■■■□□ 2.11
TUBGCP6Q96RT7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC28.25■■■□□ 2.11
TUBGCP6Q96RT7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TUBGCP6Q96RT7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
TUBGCP6Q96RT7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TUBGCP6Q96RT7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
TUBGCP6Q96RT7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC28.25■■■□□ 2.11
TUBGCP6Q96RT7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC28.25■■■□□ 2.11
TUBGCP6Q96RT7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC28.25■■■□□ 2.11
TUBGCP6Q96RT7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
TUBGCP6Q96RT7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TUBGCP6Q96RT7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
TUBGCP6Q96RT7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TUBGCP6Q96RT7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
TUBGCP6Q96RT7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC28.24■■■□□ 2.11
TUBGCP6Q96RT7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
TUBGCP6Q96RT7 FP325331.1-202ENST00000623531 1380 ntBASIC28.24■■■□□ 2.11
TUBGCP6Q96RT7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC28.24■■■□□ 2.11
TUBGCP6Q96RT7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TUBGCP6Q96RT7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
TUBGCP6Q96RT7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TUBGCP6Q96RT7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC28.23■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms