Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.75■□□□□ 0.59
CSMD1Q96PZ7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSMD1Q96PZ7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSMD1Q96PZ7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CSMD1Q96PZ7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSMD1Q96PZ7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.74■□□□□ 0.59
CSMD1Q96PZ7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.74■□□□□ 0.59
CSMD1Q96PZ7 AC105036.2-201ENST00000569468 176 ntBASIC18.74■□□□□ 0.59
CSMD1Q96PZ7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.74■□□□□ 0.59
CSMD1Q96PZ7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CSMD1Q96PZ7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSMD1Q96PZ7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CSMD1Q96PZ7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.74■□□□□ 0.59
CSMD1Q96PZ7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSMD1Q96PZ7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.74■□□□□ 0.59
CSMD1Q96PZ7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.74■□□□□ 0.59
CSMD1Q96PZ7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.74■□□□□ 0.59
CSMD1Q96PZ7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CSMD1Q96PZ7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CSMD1Q96PZ7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.73■□□□□ 0.59
CSMD1Q96PZ7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSMD1Q96PZ7 AC073912.3-201ENST00000624414 853 ntBASIC18.73■□□□□ 0.59
CSMD1Q96PZ7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSMD1Q96PZ7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSMD1Q96PZ7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.73■□□□□ 0.59
CSMD1Q96PZ7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSMD1Q96PZ7 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.73■□□□□ 0.59
CSMD1Q96PZ7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.73■□□□□ 0.59
CSMD1Q96PZ7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.73■□□□□ 0.59
CSMD1Q96PZ7 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.73■□□□□ 0.59
CSMD1Q96PZ7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSMD1Q96PZ7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CSMD1Q96PZ7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.72■□□□□ 0.59
CSMD1Q96PZ7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.72■□□□□ 0.59
CSMD1Q96PZ7 MIR4497-201ENST00000583208 89 ntBASIC18.72■□□□□ 0.59
CSMD1Q96PZ7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CSMD1Q96PZ7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CSMD1Q96PZ7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CSMD1Q96PZ7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CSMD1Q96PZ7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
CSMD1Q96PZ7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC18.72■□□□□ 0.59
CSMD1Q96PZ7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CSMD1Q96PZ7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.72■□□□□ 0.59
CSMD1Q96PZ7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.72■□□□□ 0.59
CSMD1Q96PZ7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.71■□□□□ 0.59
CSMD1Q96PZ7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CSMD1Q96PZ7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CSMD1Q96PZ7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CSMD1Q96PZ7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CSMD1Q96PZ7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CSMD1Q96PZ7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CSMD1Q96PZ7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CSMD1Q96PZ7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CSMD1Q96PZ7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CSMD1Q96PZ7 KRT87P-202ENST00000534226 1464 ntBASIC18.71■□□□□ 0.59
CSMD1Q96PZ7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CSMD1Q96PZ7 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.71■□□□□ 0.59
CSMD1Q96PZ7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.71■□□□□ 0.59
CSMD1Q96PZ7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.71■□□□□ 0.59
CSMD1Q96PZ7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CSMD1Q96PZ7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CSMD1Q96PZ7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CSMD1Q96PZ7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CSMD1Q96PZ7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CSMD1Q96PZ7 AL158047.1-201ENST00000445918 881 ntBASIC18.71■□□□□ 0.59
CSMD1Q96PZ7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSMD1Q96PZ7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.7■□□□□ 0.58
CSMD1Q96PZ7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.7■□□□□ 0.58
CSMD1Q96PZ7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CSMD1Q96PZ7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSMD1Q96PZ7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSMD1Q96PZ7 AC133552.2-202ENST00000575694 574 ntBASIC18.7■□□□□ 0.58
CSMD1Q96PZ7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSMD1Q96PZ7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CSMD1Q96PZ7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSMD1Q96PZ7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSMD1Q96PZ7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.7■□□□□ 0.58
CSMD1Q96PZ7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.7■□□□□ 0.58
CSMD1Q96PZ7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.7■□□□□ 0.58
CSMD1Q96PZ7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSMD1Q96PZ7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CSMD1Q96PZ7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.69■□□□□ 0.58
CSMD1Q96PZ7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.69■□□□□ 0.58
CSMD1Q96PZ7 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.69■□□□□ 0.58
CSMD1Q96PZ7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.69■□□□□ 0.58
CSMD1Q96PZ7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.69■□□□□ 0.58
CSMD1Q96PZ7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSMD1Q96PZ7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CSMD1Q96PZ7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSMD1Q96PZ7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.69■□□□□ 0.58
CSMD1Q96PZ7 AC020928.2-201ENST00000588717 2197 ntBASIC18.69■□□□□ 0.58
CSMD1Q96PZ7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSMD1Q96PZ7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CSMD1Q96PZ7 LINC01023-201ENST00000606054 436 ntBASIC18.68■□□□□ 0.58
CSMD1Q96PZ7 AC006058.3-201ENST00000606217 1069 ntBASIC18.68■□□□□ 0.58
CSMD1Q96PZ7 MYC-209ENST00000641252 345 ntBASIC18.68■□□□□ 0.58
CSMD1Q96PZ7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSMD1Q96PZ7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
CSMD1Q96PZ7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.68■□□□□ 0.58
CSMD1Q96PZ7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms