Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GAFA1Q96PS6 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GAFA1Q96PS6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GAFA1Q96PS6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GAFA1Q96PS6 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
GAFA1Q96PS6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GAFA1Q96PS6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GAFA1Q96PS6 RASA4CP-201ENST00000424092 1398 ntBASIC18.19■□□□□ 0.5
GAFA1Q96PS6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GAFA1Q96PS6 AC010141.3-201ENST00000456659 717 ntBASIC18.19■□□□□ 0.5
GAFA1Q96PS6 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GAFA1Q96PS6 AC142381.2-201ENST00000566120 298 ntBASIC18.19■□□□□ 0.5
GAFA1Q96PS6 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.19■□□□□ 0.5
GAFA1Q96PS6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
GAFA1Q96PS6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.19■□□□□ 0.5
GAFA1Q96PS6 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
GAFA1Q96PS6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GAFA1Q96PS6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.18■□□□□ 0.5
GAFA1Q96PS6 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
GAFA1Q96PS6 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GAFA1Q96PS6 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.18■□□□□ 0.5
GAFA1Q96PS6 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.18■□□□□ 0.5
GAFA1Q96PS6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GAFA1Q96PS6 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.18■□□□□ 0.5
GAFA1Q96PS6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.18■□□□□ 0.5
GAFA1Q96PS6 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GAFA1Q96PS6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GAFA1Q96PS6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
GAFA1Q96PS6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GAFA1Q96PS6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
GAFA1Q96PS6 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GAFA1Q96PS6 AC137767.1-201ENST00000602918 1920 ntBASIC18.17■□□□□ 0.5
GAFA1Q96PS6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
GAFA1Q96PS6 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
GAFA1Q96PS6 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.17■□□□□ 0.5
GAFA1Q96PS6 IGHV3-19-201ENST00000521488 291 ntBASIC18.17■□□□□ 0.5
GAFA1Q96PS6 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
GAFA1Q96PS6 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GAFA1Q96PS6 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
GAFA1Q96PS6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
GAFA1Q96PS6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GAFA1Q96PS6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GAFA1Q96PS6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
GAFA1Q96PS6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
GAFA1Q96PS6 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
GAFA1Q96PS6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GAFA1Q96PS6 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GAFA1Q96PS6 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GAFA1Q96PS6 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GAFA1Q96PS6 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
GAFA1Q96PS6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.16■□□□□ 0.5
GAFA1Q96PS6 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.16■□□□□ 0.5
GAFA1Q96PS6 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.16■□□□□ 0.5
GAFA1Q96PS6 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
GAFA1Q96PS6 GUSBP5-202ENST00000510805 1989 ntBASIC18.16■□□□□ 0.5
GAFA1Q96PS6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GAFA1Q96PS6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
GAFA1Q96PS6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GAFA1Q96PS6 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GAFA1Q96PS6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GAFA1Q96PS6 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
GAFA1Q96PS6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
GAFA1Q96PS6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GAFA1Q96PS6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
GAFA1Q96PS6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GAFA1Q96PS6 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.15■□□□□ 0.5
GAFA1Q96PS6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GAFA1Q96PS6 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GAFA1Q96PS6 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.15■□□□□ 0.5
GAFA1Q96PS6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.15■□□□□ 0.5
GAFA1Q96PS6 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GAFA1Q96PS6 AC080038.3-201ENST00000623346 1952 ntBASIC18.15■□□□□ 0.5
GAFA1Q96PS6 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
GAFA1Q96PS6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
GAFA1Q96PS6 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
GAFA1Q96PS6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.14■□□□□ 0.49
GAFA1Q96PS6 OXCT2P1-201ENST00000447263 1535 ntBASIC18.14■□□□□ 0.49
GAFA1Q96PS6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GAFA1Q96PS6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
GAFA1Q96PS6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
GAFA1Q96PS6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
GAFA1Q96PS6 AC079089.2-201ENST00000531211 1277 ntBASIC18.14■□□□□ 0.49
GAFA1Q96PS6 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.14■□□□□ 0.49
GAFA1Q96PS6 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.14■□□□□ 0.49
GAFA1Q96PS6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
GAFA1Q96PS6 TSPY26P-201ENST00000476365 1326 ntBASIC18.14■□□□□ 0.49
GAFA1Q96PS6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.14■□□□□ 0.49
GAFA1Q96PS6 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
GAFA1Q96PS6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GAFA1Q96PS6 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GAFA1Q96PS6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
GAFA1Q96PS6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GAFA1Q96PS6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GAFA1Q96PS6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
GAFA1Q96PS6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.13■□□□□ 0.49
GAFA1Q96PS6 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GAFA1Q96PS6 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
GAFA1Q96PS6 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
GAFA1Q96PS6 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
GAFA1Q96PS6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms