Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXN4Q96NZ1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.52■□□□□ 0.72
FOXN4Q96NZ1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
FOXN4Q96NZ1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXN4Q96NZ1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXN4Q96NZ1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
FOXN4Q96NZ1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.52■□□□□ 0.71
FOXN4Q96NZ1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
FOXN4Q96NZ1 AC139530.1-201ENST00000575312 1977 ntBASIC19.52■□□□□ 0.71
FOXN4Q96NZ1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN4Q96NZ1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN4Q96NZ1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
FOXN4Q96NZ1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
FOXN4Q96NZ1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.51■□□□□ 0.71
FOXN4Q96NZ1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN4Q96NZ1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN4Q96NZ1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN4Q96NZ1 AC096631.2-201ENST00000436136 790 ntBASIC19.51■□□□□ 0.71
FOXN4Q96NZ1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN4Q96NZ1 AL512631.2-201ENST00000604634 923 ntBASIC19.51■□□□□ 0.71
FOXN4Q96NZ1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.51■□□□□ 0.71
FOXN4Q96NZ1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN4Q96NZ1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN4Q96NZ1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN4Q96NZ1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN4Q96NZ1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXN4Q96NZ1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
FOXN4Q96NZ1 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
FOXN4Q96NZ1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXN4Q96NZ1 AC006455.2-201ENST00000429931 906 ntBASIC19.5■□□□□ 0.71
FOXN4Q96NZ1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXN4Q96NZ1 AC110285.6-201ENST00000617652 491 ntBASIC19.5■□□□□ 0.71
FOXN4Q96NZ1 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.5■□□□□ 0.71
FOXN4Q96NZ1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXN4Q96NZ1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.5■□□□□ 0.71
FOXN4Q96NZ1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXN4Q96NZ1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXN4Q96NZ1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.5■□□□□ 0.71
FOXN4Q96NZ1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.5■□□□□ 0.71
FOXN4Q96NZ1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.5■□□□□ 0.71
FOXN4Q96NZ1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
FOXN4Q96NZ1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.5■□□□□ 0.71
FOXN4Q96NZ1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXN4Q96NZ1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXN4Q96NZ1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXN4Q96NZ1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
FOXN4Q96NZ1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
FOXN4Q96NZ1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
FOXN4Q96NZ1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
FOXN4Q96NZ1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXN4Q96NZ1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
FOXN4Q96NZ1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXN4Q96NZ1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
FOXN4Q96NZ1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
FOXN4Q96NZ1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.49■□□□□ 0.71
FOXN4Q96NZ1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXN4Q96NZ1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
FOXN4Q96NZ1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXN4Q96NZ1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
FOXN4Q96NZ1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
FOXN4Q96NZ1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.49■□□□□ 0.71
FOXN4Q96NZ1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXN4Q96NZ1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.49■□□□□ 0.71
FOXN4Q96NZ1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
FOXN4Q96NZ1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXN4Q96NZ1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXN4Q96NZ1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXN4Q96NZ1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
FOXN4Q96NZ1 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXN4Q96NZ1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
FOXN4Q96NZ1 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.48■□□□□ 0.71
FOXN4Q96NZ1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.48■□□□□ 0.71
FOXN4Q96NZ1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXN4Q96NZ1 CLDN5-201ENST00000403084 2357 ntBASIC19.48■□□□□ 0.71
FOXN4Q96NZ1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
FOXN4Q96NZ1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXN4Q96NZ1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
FOXN4Q96NZ1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXN4Q96NZ1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXN4Q96NZ1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
FOXN4Q96NZ1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.47■□□□□ 0.71
FOXN4Q96NZ1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.47■□□□□ 0.71
FOXN4Q96NZ1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.47■□□□□ 0.71
FOXN4Q96NZ1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXN4Q96NZ1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXN4Q96NZ1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXN4Q96NZ1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
FOXN4Q96NZ1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
FOXN4Q96NZ1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.47■□□□□ 0.71
FOXN4Q96NZ1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
FOXN4Q96NZ1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.46■□□□□ 0.71
FOXN4Q96NZ1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.46■□□□□ 0.71
FOXN4Q96NZ1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.46■□□□□ 0.71
FOXN4Q96NZ1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FOXN4Q96NZ1 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXN4Q96NZ1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FOXN4Q96NZ1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
FOXN4Q96NZ1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.46■□□□□ 0.71
FOXN4Q96NZ1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FOXN4Q96NZ1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms