Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AL512631.2-201ENST00000604634 923 ntBASIC23.09■■□□□ 1.29
TRIM11Q96F44 AL031602.1-201ENST00000633169 911 ntBASIC23.09■■□□□ 1.29
TRIM11Q96F44 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM11Q96F44 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM11Q96F44 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
TRIM11Q96F44 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.09■■□□□ 1.29
TRIM11Q96F44 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.29
TRIM11Q96F44 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRIM11Q96F44 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TRIM11Q96F44 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRIM11Q96F44 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TRIM11Q96F44 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.08■■□□□ 1.29
TRIM11Q96F44 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
TRIM11Q96F44 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
TRIM11Q96F44 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
TRIM11Q96F44 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
TRIM11Q96F44 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
TRIM11Q96F44 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.08■■□□□ 1.28
TRIM11Q96F44 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM11Q96F44 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM11Q96F44 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM11Q96F44 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM11Q96F44 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.07■■□□□ 1.28
TRIM11Q96F44 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.07■■□□□ 1.28
TRIM11Q96F44 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM11Q96F44 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.07■■□□□ 1.28
TRIM11Q96F44 MIR3181-201ENST00000578512 73 ntBASIC23.07■■□□□ 1.28
TRIM11Q96F44 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.07■■□□□ 1.28
TRIM11Q96F44 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM11Q96F44 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM11Q96F44 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM11Q96F44 MYB-221ENST00000527615 2381 ntTSL 5 BASIC23.07■■□□□ 1.28
TRIM11Q96F44 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM11Q96F44 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM11Q96F44 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM11Q96F44 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM11Q96F44 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM11Q96F44 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.06■■□□□ 1.28
TRIM11Q96F44 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM11Q96F44 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM11Q96F44 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
TRIM11Q96F44 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.06■■□□□ 1.28
TRIM11Q96F44 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.06■■□□□ 1.28
TRIM11Q96F44 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.06■■□□□ 1.28
TRIM11Q96F44 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.06■■□□□ 1.28
TRIM11Q96F44 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM11Q96F44 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM11Q96F44 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM11Q96F44 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM11Q96F44 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM11Q96F44 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
TRIM11Q96F44 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.05■■□□□ 1.28
TRIM11Q96F44 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM11Q96F44 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM11Q96F44 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.05■■□□□ 1.28
TRIM11Q96F44 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.05■■□□□ 1.28
TRIM11Q96F44 AC068587.7-201ENST00000641602 218 ntBASIC23.05■■□□□ 1.28
TRIM11Q96F44 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM11Q96F44 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
TRIM11Q96F44 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM11Q96F44 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.05■■□□□ 1.28
TRIM11Q96F44 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM11Q96F44 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM11Q96F44 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.05■■□□□ 1.28
TRIM11Q96F44 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.05■■□□□ 1.28
TRIM11Q96F44 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM11Q96F44 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM11Q96F44 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
TRIM11Q96F44 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM11Q96F44 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM11Q96F44 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.04■■□□□ 1.28
TRIM11Q96F44 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM11Q96F44 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.04■■□□□ 1.28
TRIM11Q96F44 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM11Q96F44 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM11Q96F44 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.04■■□□□ 1.28
TRIM11Q96F44 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.04■■□□□ 1.28
TRIM11Q96F44 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.04■■□□□ 1.28
TRIM11Q96F44 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM11Q96F44 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM11Q96F44 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.04■■□□□ 1.28
TRIM11Q96F44 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM11Q96F44 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM11Q96F44 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM11Q96F44 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM11Q96F44 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.03■■□□□ 1.28
TRIM11Q96F44 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM11Q96F44 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM11Q96F44 OR2I1P-207ENST00000453522 948 ntBASIC23.03■■□□□ 1.28
TRIM11Q96F44 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
TRIM11Q96F44 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.03■■□□□ 1.28
TRIM11Q96F44 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.03■■□□□ 1.28
TRIM11Q96F44 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM11Q96F44 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM11Q96F44 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM11Q96F44 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM11Q96F44 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
TRIM11Q96F44 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM11Q96F44 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.02■■□□□ 1.28
TRIM11Q96F44 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms