Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
VPS33AQ96AX1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VPS33AQ96AX1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS33AQ96AX1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.92■□□□□ 0.94
VPS33AQ96AX1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VPS33AQ96AX1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS33AQ96AX1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.92■□□□□ 0.94
VPS33AQ96AX1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.92■□□□□ 0.94
VPS33AQ96AX1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS33AQ96AX1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS33AQ96AX1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
VPS33AQ96AX1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
VPS33AQ96AX1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
VPS33AQ96AX1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VPS33AQ96AX1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS33AQ96AX1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS33AQ96AX1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS33AQ96AX1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS33AQ96AX1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS33AQ96AX1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS33AQ96AX1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VPS33AQ96AX1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VPS33AQ96AX1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
VPS33AQ96AX1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VPS33AQ96AX1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.91■□□□□ 0.94
VPS33AQ96AX1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.91■□□□□ 0.94
VPS33AQ96AX1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
VPS33AQ96AX1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VPS33AQ96AX1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
VPS33AQ96AX1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.91■□□□□ 0.94
VPS33AQ96AX1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
VPS33AQ96AX1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.91■□□□□ 0.94
VPS33AQ96AX1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.91■□□□□ 0.94
VPS33AQ96AX1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VPS33AQ96AX1 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VPS33AQ96AX1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.91■□□□□ 0.94
VPS33AQ96AX1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VPS33AQ96AX1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
VPS33AQ96AX1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
VPS33AQ96AX1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
VPS33AQ96AX1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
VPS33AQ96AX1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VPS33AQ96AX1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VPS33AQ96AX1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VPS33AQ96AX1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.9■□□□□ 0.94
VPS33AQ96AX1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VPS33AQ96AX1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VPS33AQ96AX1 AC021242.3-201ENST00000607598 1377 ntBASIC20.9■□□□□ 0.94
VPS33AQ96AX1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.9■□□□□ 0.94
VPS33AQ96AX1 DUX4L4-201ENST00000566884 1269 ntBASIC20.9■□□□□ 0.94
VPS33AQ96AX1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
VPS33AQ96AX1 AC009086.3-201ENST00000623486 1008 ntBASIC20.9■□□□□ 0.94
VPS33AQ96AX1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
VPS33AQ96AX1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VPS33AQ96AX1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.9■□□□□ 0.94
VPS33AQ96AX1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
VPS33AQ96AX1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
VPS33AQ96AX1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.9■□□□□ 0.94
VPS33AQ96AX1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
VPS33AQ96AX1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VPS33AQ96AX1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.9■□□□□ 0.94
VPS33AQ96AX1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.9■□□□□ 0.94
VPS33AQ96AX1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.89■□□□□ 0.93
VPS33AQ96AX1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
VPS33AQ96AX1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS33AQ96AX1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS33AQ96AX1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.89■□□□□ 0.93
VPS33AQ96AX1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.89■□□□□ 0.93
VPS33AQ96AX1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
VPS33AQ96AX1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS33AQ96AX1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VPS33AQ96AX1 AC004687.1-201ENST00000579003 1625 ntBASIC20.89■□□□□ 0.93
VPS33AQ96AX1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS33AQ96AX1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.88■□□□□ 0.93
VPS33AQ96AX1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS33AQ96AX1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VPS33AQ96AX1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS33AQ96AX1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VPS33AQ96AX1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.88■□□□□ 0.93
VPS33AQ96AX1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VPS33AQ96AX1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS33AQ96AX1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS33AQ96AX1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS33AQ96AX1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS33AQ96AX1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
VPS33AQ96AX1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VPS33AQ96AX1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.88■□□□□ 0.93
VPS33AQ96AX1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VPS33AQ96AX1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS33AQ96AX1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.87■□□□□ 0.93
VPS33AQ96AX1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS33AQ96AX1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS33AQ96AX1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.87■□□□□ 0.93
VPS33AQ96AX1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS33AQ96AX1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS33AQ96AX1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.87■□□□□ 0.93
VPS33AQ96AX1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS33AQ96AX1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS33AQ96AX1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.87■□□□□ 0.93
VPS33AQ96AX1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms