Protein–RNA interactions for Protein: Q8WTU2

SSC4D, Scavenger receptor cysteine-rich domain-containing group B protein, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4DQ8WTU2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SSC4DQ8WTU2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSC4DQ8WTU2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.8■□□□□ 0.76
SSC4DQ8WTU2 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SSC4DQ8WTU2 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.8■□□□□ 0.76
SSC4DQ8WTU2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.8■□□□□ 0.76
SSC4DQ8WTU2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.8■□□□□ 0.76
SSC4DQ8WTU2 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSC4DQ8WTU2 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.8■□□□□ 0.76
SSC4DQ8WTU2 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSC4DQ8WTU2 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SSC4DQ8WTU2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SSC4DQ8WTU2 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.79■□□□□ 0.76
SSC4DQ8WTU2 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSC4DQ8WTU2 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSC4DQ8WTU2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.79■□□□□ 0.76
SSC4DQ8WTU2 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSC4DQ8WTU2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSC4DQ8WTU2 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SSC4DQ8WTU2 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.79■□□□□ 0.76
SSC4DQ8WTU2 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.79■□□□□ 0.76
SSC4DQ8WTU2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.79■□□□□ 0.76
SSC4DQ8WTU2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SSC4DQ8WTU2 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSC4DQ8WTU2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SSC4DQ8WTU2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.79■□□□□ 0.76
SSC4DQ8WTU2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSC4DQ8WTU2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
SSC4DQ8WTU2 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSC4DQ8WTU2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSC4DQ8WTU2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSC4DQ8WTU2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SSC4DQ8WTU2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.78■□□□□ 0.76
SSC4DQ8WTU2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SSC4DQ8WTU2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.78■□□□□ 0.76
SSC4DQ8WTU2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.78■□□□□ 0.76
SSC4DQ8WTU2 AC093827.2-201ENST00000512654 315 ntBASIC19.78■□□□□ 0.76
SSC4DQ8WTU2 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.78■□□□□ 0.76
SSC4DQ8WTU2 KRT18P6-201ENST00000555540 1265 ntBASIC19.78■□□□□ 0.76
SSC4DQ8WTU2 AC142086.2-201ENST00000569753 217 ntBASIC19.78■□□□□ 0.76
SSC4DQ8WTU2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.78■□□□□ 0.76
SSC4DQ8WTU2 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.78■□□□□ 0.76
SSC4DQ8WTU2 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.78■□□□□ 0.76
SSC4DQ8WTU2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSC4DQ8WTU2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.78■□□□□ 0.76
SSC4DQ8WTU2 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SSC4DQ8WTU2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSC4DQ8WTU2 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSC4DQ8WTU2 KRT19P1-201ENST00000405746 1186 ntBASIC19.77■□□□□ 0.76
SSC4DQ8WTU2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.77■□□□□ 0.76
SSC4DQ8WTU2 OR2I1P-207ENST00000453522 948 ntBASIC19.77■□□□□ 0.76
SSC4DQ8WTU2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.77■□□□□ 0.76
SSC4DQ8WTU2 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.77■□□□□ 0.76
SSC4DQ8WTU2 AC010525.1-201ENST00000585559 441 ntBASIC19.77■□□□□ 0.76
SSC4DQ8WTU2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.77■□□□□ 0.76
SSC4DQ8WTU2 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSC4DQ8WTU2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.77■□□□□ 0.76
SSC4DQ8WTU2 AP004607.4-201ENST00000530158 1459 ntBASIC19.77■□□□□ 0.76
SSC4DQ8WTU2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.77■□□□□ 0.76
SSC4DQ8WTU2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSC4DQ8WTU2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSC4DQ8WTU2 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSC4DQ8WTU2 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.76■□□□□ 0.75
SSC4DQ8WTU2 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSC4DQ8WTU2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.76■□□□□ 0.75
SSC4DQ8WTU2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.76■□□□□ 0.75
SSC4DQ8WTU2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSC4DQ8WTU2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSC4DQ8WTU2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSC4DQ8WTU2 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSC4DQ8WTU2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.76■□□□□ 0.75
SSC4DQ8WTU2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSC4DQ8WTU2 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
SSC4DQ8WTU2 KRT18P11-201ENST00000435214 1283 ntBASIC19.76■□□□□ 0.75
SSC4DQ8WTU2 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.76■□□□□ 0.75
SSC4DQ8WTU2 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSC4DQ8WTU2 DUX4L4-201ENST00000566884 1269 ntBASIC19.76■□□□□ 0.75
SSC4DQ8WTU2 AC011767.1-201ENST00000617410 1153 ntBASIC19.76■□□□□ 0.75
SSC4DQ8WTU2 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSC4DQ8WTU2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSC4DQ8WTU2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSC4DQ8WTU2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.76■□□□□ 0.75
SSC4DQ8WTU2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSC4DQ8WTU2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.76■□□□□ 0.75
SSC4DQ8WTU2 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SSC4DQ8WTU2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSC4DQ8WTU2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.75■□□□□ 0.75
SSC4DQ8WTU2 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSC4DQ8WTU2 FAM201B-201ENST00000458407 597 ntBASIC19.75■□□□□ 0.75
SSC4DQ8WTU2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.75■□□□□ 0.75
SSC4DQ8WTU2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.75■□□□□ 0.75
SSC4DQ8WTU2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.75■□□□□ 0.75
SSC4DQ8WTU2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSC4DQ8WTU2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSC4DQ8WTU2 AL161729.1-201ENST00000604104 1402 ntBASIC19.75■□□□□ 0.75
SSC4DQ8WTU2 AC004854.2-201ENST00000608450 1441 ntBASIC19.75■□□□□ 0.75
SSC4DQ8WTU2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.74■□□□□ 0.75
SSC4DQ8WTU2 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSC4DQ8WTU2 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SSC4DQ8WTU2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms