Protein–RNA interactions for Protein: Q8TCU5

GRIN3A, Glutamate receptor ionotropic, NMDA 3A, humanhuman

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3AQ8TCU5 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
GRIN3AQ8TCU5 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
GRIN3AQ8TCU5 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
GRIN3AQ8TCU5 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
GRIN3AQ8TCU5 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
GRIN3AQ8TCU5 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
GRIN3AQ8TCU5 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
GRIN3AQ8TCU5 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.21■■□□□ 1.15
GRIN3AQ8TCU5 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.21■■□□□ 1.15
GRIN3AQ8TCU5 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
GRIN3AQ8TCU5 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.21■■□□□ 1.15
GRIN3AQ8TCU5 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.21■■□□□ 1.15
GRIN3AQ8TCU5 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
GRIN3AQ8TCU5 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
GRIN3AQ8TCU5 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
GRIN3AQ8TCU5 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
GRIN3AQ8TCU5 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
GRIN3AQ8TCU5 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.2■■□□□ 1.14
GRIN3AQ8TCU5 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
GRIN3AQ8TCU5 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.19■■□□□ 1.14
GRIN3AQ8TCU5 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
GRIN3AQ8TCU5 MIR572-201ENST00000384983 95 ntBASIC22.19■■□□□ 1.14
GRIN3AQ8TCU5 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.19■■□□□ 1.14
GRIN3AQ8TCU5 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.19■■□□□ 1.14
GRIN3AQ8TCU5 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.19■■□□□ 1.14
GRIN3AQ8TCU5 MIR6084-201ENST00000622012 110 ntBASIC22.19■■□□□ 1.14
GRIN3AQ8TCU5 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
GRIN3AQ8TCU5 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
GRIN3AQ8TCU5 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.19■■□□□ 1.14
GRIN3AQ8TCU5 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
GRIN3AQ8TCU5 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.19■■□□□ 1.14
GRIN3AQ8TCU5 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.19■■□□□ 1.14
GRIN3AQ8TCU5 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
GRIN3AQ8TCU5 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
GRIN3AQ8TCU5 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
GRIN3AQ8TCU5 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
GRIN3AQ8TCU5 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
GRIN3AQ8TCU5 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
GRIN3AQ8TCU5 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
GRIN3AQ8TCU5 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
GRIN3AQ8TCU5 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
GRIN3AQ8TCU5 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC22.18■■□□□ 1.14
GRIN3AQ8TCU5 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
GRIN3AQ8TCU5 SP2-202ENST00000613139 908 ntTSL 5 BASIC22.18■■□□□ 1.14
GRIN3AQ8TCU5 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
GRIN3AQ8TCU5 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
GRIN3AQ8TCU5 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
GRIN3AQ8TCU5 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.17■■□□□ 1.14
GRIN3AQ8TCU5 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
GRIN3AQ8TCU5 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
GRIN3AQ8TCU5 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.17■■□□□ 1.14
GRIN3AQ8TCU5 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.17■■□□□ 1.14
GRIN3AQ8TCU5 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
GRIN3AQ8TCU5 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
GRIN3AQ8TCU5 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.17■■□□□ 1.14
GRIN3AQ8TCU5 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
GRIN3AQ8TCU5 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
GRIN3AQ8TCU5 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.16■■□□□ 1.14
GRIN3AQ8TCU5 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
GRIN3AQ8TCU5 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
GRIN3AQ8TCU5 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.16■■□□□ 1.14
GRIN3AQ8TCU5 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
GRIN3AQ8TCU5 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.16■■□□□ 1.14
GRIN3AQ8TCU5 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
GRIN3AQ8TCU5 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
GRIN3AQ8TCU5 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
GRIN3AQ8TCU5 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
GRIN3AQ8TCU5 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.15■■□□□ 1.14
GRIN3AQ8TCU5 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
GRIN3AQ8TCU5 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.15■■□□□ 1.14
GRIN3AQ8TCU5 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
GRIN3AQ8TCU5 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
GRIN3AQ8TCU5 AC097381.1-201ENST00000429019 1296 ntBASIC22.15■■□□□ 1.14
GRIN3AQ8TCU5 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.15■■□□□ 1.14
GRIN3AQ8TCU5 AC012414.1-201ENST00000556676 535 ntBASIC22.15■■□□□ 1.14
GRIN3AQ8TCU5 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
GRIN3AQ8TCU5 AC087623.3-201ENST00000607047 1098 ntBASIC22.15■■□□□ 1.14
GRIN3AQ8TCU5 MIR6821-201ENST00000617625 74 ntBASIC22.15■■□□□ 1.14
GRIN3AQ8TCU5 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.15■■□□□ 1.14
GRIN3AQ8TCU5 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
GRIN3AQ8TCU5 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
GRIN3AQ8TCU5 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
GRIN3AQ8TCU5 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
GRIN3AQ8TCU5 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
GRIN3AQ8TCU5 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.15■■□□□ 1.14
GRIN3AQ8TCU5 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.14■■□□□ 1.14
GRIN3AQ8TCU5 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.14
GRIN3AQ8TCU5 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
GRIN3AQ8TCU5 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
GRIN3AQ8TCU5 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
GRIN3AQ8TCU5 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.14■■□□□ 1.13
GRIN3AQ8TCU5 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.14■■□□□ 1.13
GRIN3AQ8TCU5 MIR5787-201ENST00000611784 55 ntBASIC22.14■■□□□ 1.13
GRIN3AQ8TCU5 AL358852.1-201ENST00000623174 1268 ntBASIC22.14■■□□□ 1.13
GRIN3AQ8TCU5 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
GRIN3AQ8TCU5 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
GRIN3AQ8TCU5 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
GRIN3AQ8TCU5 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
GRIN3AQ8TCU5 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
GRIN3AQ8TCU5 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms