Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.13■□□□□ 0.33
LINC01006Q8NI28 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.13■□□□□ 0.33
LINC01006Q8NI28 KRT18P11-201ENST00000435214 1283 ntBASIC17.13■□□□□ 0.33
LINC01006Q8NI28 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.13■□□□□ 0.33
LINC01006Q8NI28 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.13■□□□□ 0.33
LINC01006Q8NI28 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LINC01006Q8NI28 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.13■□□□□ 0.33
LINC01006Q8NI28 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01006Q8NI28 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01006Q8NI28 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01006Q8NI28 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LINC01006Q8NI28 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01006Q8NI28 ESRRAP2-201ENST00000418437 1549 ntBASIC17.12■□□□□ 0.33
LINC01006Q8NI28 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01006Q8NI28 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01006Q8NI28 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01006Q8NI28 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01006Q8NI28 AC006970.2-201ENST00000450065 779 ntBASIC17.12■□□□□ 0.33
LINC01006Q8NI28 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.12■□□□□ 0.33
LINC01006Q8NI28 AC011767.1-201ENST00000617410 1153 ntBASIC17.12■□□□□ 0.33
LINC01006Q8NI28 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01006Q8NI28 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01006Q8NI28 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01006Q8NI28 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01006Q8NI28 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01006Q8NI28 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC01006Q8NI28 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC01006Q8NI28 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC01006Q8NI28 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LINC01006Q8NI28 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.11■□□□□ 0.33
LINC01006Q8NI28 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.11■□□□□ 0.33
LINC01006Q8NI28 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC01006Q8NI28 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.11■□□□□ 0.33
LINC01006Q8NI28 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.11■□□□□ 0.33
LINC01006Q8NI28 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.11■□□□□ 0.33
LINC01006Q8NI28 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LINC01006Q8NI28 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LINC01006Q8NI28 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.1■□□□□ 0.33
LINC01006Q8NI28 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01006Q8NI28 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01006Q8NI28 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
LINC01006Q8NI28 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.1■□□□□ 0.33
LINC01006Q8NI28 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01006Q8NI28 CROCCP5-201ENST00000436658 830 ntBASIC17.1■□□□□ 0.33
LINC01006Q8NI28 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.1■□□□□ 0.33
LINC01006Q8NI28 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.1■□□□□ 0.33
LINC01006Q8NI28 AC104771.1-201ENST00000603335 964 ntBASIC17.1■□□□□ 0.33
LINC01006Q8NI28 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LINC01006Q8NI28 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LINC01006Q8NI28 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01006Q8NI28 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LINC01006Q8NI28 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01006Q8NI28 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
LINC01006Q8NI28 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.09■□□□□ 0.33
LINC01006Q8NI28 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.09■□□□□ 0.33
LINC01006Q8NI28 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01006Q8NI28 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.09■□□□□ 0.33
LINC01006Q8NI28 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01006Q8NI28 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC17.09■□□□□ 0.33
LINC01006Q8NI28 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01006Q8NI28 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LINC01006Q8NI28 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LINC01006Q8NI28 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LINC01006Q8NI28 DUSP8P3-201ENST00000399571 1760 ntBASIC17.08■□□□□ 0.33
LINC01006Q8NI28 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC01006Q8NI28 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC01006Q8NI28 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LINC01006Q8NI28 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LINC01006Q8NI28 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.08■□□□□ 0.32
LINC01006Q8NI28 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.08■□□□□ 0.32
LINC01006Q8NI28 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.08■□□□□ 0.32
LINC01006Q8NI28 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.08■□□□□ 0.32
LINC01006Q8NI28 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.08■□□□□ 0.32
LINC01006Q8NI28 AL109923.1-201ENST00000618799 583 ntBASIC17.08■□□□□ 0.32
LINC01006Q8NI28 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC01006Q8NI28 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.07■□□□□ 0.32
LINC01006Q8NI28 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01006Q8NI28 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01006Q8NI28 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
LINC01006Q8NI28 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01006Q8NI28 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
LINC01006Q8NI28 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01006Q8NI28 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01006Q8NI28 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01006Q8NI28 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01006Q8NI28 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01006Q8NI28 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.07■□□□□ 0.32
LINC01006Q8NI28 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01006Q8NI28 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
LINC01006Q8NI28 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.07■□□□□ 0.32
LINC01006Q8NI28 AC005224.4-201ENST00000583262 1652 ntBASIC17.07■□□□□ 0.32
LINC01006Q8NI28 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01006Q8NI28 AC009237.3-201ENST00000393279 1427 ntBASIC17.06■□□□□ 0.32
LINC01006Q8NI28 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01006Q8NI28 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LINC01006Q8NI28 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01006Q8NI28 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01006Q8NI28 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01006Q8NI28 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01006Q8NI28 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms