Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
SRFBP1Q8NEF9 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.81■□□□□ 0.92
SRFBP1Q8NEF9 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.81■□□□□ 0.92
SRFBP1Q8NEF9 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SRFBP1Q8NEF9 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SRFBP1Q8NEF9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.81■□□□□ 0.92
SRFBP1Q8NEF9 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SRFBP1Q8NEF9 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRFBP1Q8NEF9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRFBP1Q8NEF9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRFBP1Q8NEF9 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.8■□□□□ 0.92
SRFBP1Q8NEF9 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SRFBP1Q8NEF9 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SRFBP1Q8NEF9 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SRFBP1Q8NEF9 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRFBP1Q8NEF9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRFBP1Q8NEF9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.8■□□□□ 0.92
SRFBP1Q8NEF9 AP005435.1-201ENST00000529293 1178 ntBASIC20.8■□□□□ 0.92
SRFBP1Q8NEF9 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRFBP1Q8NEF9 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRFBP1Q8NEF9 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRFBP1Q8NEF9 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRFBP1Q8NEF9 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.79■□□□□ 0.92
SRFBP1Q8NEF9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SRFBP1Q8NEF9 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRFBP1Q8NEF9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.79■□□□□ 0.92
SRFBP1Q8NEF9 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.79■□□□□ 0.92
SRFBP1Q8NEF9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRFBP1Q8NEF9 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SRFBP1Q8NEF9 EDA-201ENST00000338901 1233 ntBASIC20.79■□□□□ 0.92
SRFBP1Q8NEF9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SRFBP1Q8NEF9 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SRFBP1Q8NEF9 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRFBP1Q8NEF9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SRFBP1Q8NEF9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRFBP1Q8NEF9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRFBP1Q8NEF9 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRFBP1Q8NEF9 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SRFBP1Q8NEF9 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.78■□□□□ 0.92
SRFBP1Q8NEF9 SLC47A1P1-202ENST00000449666 945 ntBASIC20.78■□□□□ 0.92
SRFBP1Q8NEF9 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.78■□□□□ 0.92
SRFBP1Q8NEF9 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRFBP1Q8NEF9 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
SRFBP1Q8NEF9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRFBP1Q8NEF9 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRFBP1Q8NEF9 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRFBP1Q8NEF9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRFBP1Q8NEF9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SRFBP1Q8NEF9 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SRFBP1Q8NEF9 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRFBP1Q8NEF9 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SRFBP1Q8NEF9 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRFBP1Q8NEF9 AC133561.4-201ENST00000566112 224 ntBASIC20.77■□□□□ 0.92
SRFBP1Q8NEF9 AC010525.1-201ENST00000585559 441 ntBASIC20.77■□□□□ 0.92
SRFBP1Q8NEF9 AL139246.5-201ENST00000606645 996 ntBASIC20.77■□□□□ 0.92
SRFBP1Q8NEF9 AC233992.3-201ENST00000607491 485 ntBASIC20.77■□□□□ 0.92
SRFBP1Q8NEF9 AC110285.6-201ENST00000617652 491 ntBASIC20.77■□□□□ 0.92
SRFBP1Q8NEF9 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
SRFBP1Q8NEF9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.77■□□□□ 0.92
SRFBP1Q8NEF9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.77■□□□□ 0.92
SRFBP1Q8NEF9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRFBP1Q8NEF9 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRFBP1Q8NEF9 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SRFBP1Q8NEF9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRFBP1Q8NEF9 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SRFBP1Q8NEF9 AL117328.2-201ENST00000624617 1940 ntBASIC20.76■□□□□ 0.91
SRFBP1Q8NEF9 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRFBP1Q8NEF9 AC242852.2-201ENST00000615738 1807 ntBASIC20.76■□□□□ 0.91
SRFBP1Q8NEF9 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRFBP1Q8NEF9 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SRFBP1Q8NEF9 GUSBP5-202ENST00000510805 1989 ntBASIC20.76■□□□□ 0.91
SRFBP1Q8NEF9 AC010141.3-201ENST00000456659 717 ntBASIC20.76■□□□□ 0.91
SRFBP1Q8NEF9 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SRFBP1Q8NEF9 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRFBP1Q8NEF9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRFBP1Q8NEF9 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SRFBP1Q8NEF9 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRFBP1Q8NEF9 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRFBP1Q8NEF9 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SRFBP1Q8NEF9 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRFBP1Q8NEF9 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRFBP1Q8NEF9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRFBP1Q8NEF9 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SRFBP1Q8NEF9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SRFBP1Q8NEF9 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SRFBP1Q8NEF9 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SRFBP1Q8NEF9 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.75■□□□□ 0.91
SRFBP1Q8NEF9 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SRFBP1Q8NEF9 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.75■□□□□ 0.91
SRFBP1Q8NEF9 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.75■□□□□ 0.91
SRFBP1Q8NEF9 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SRFBP1Q8NEF9 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.75■□□□□ 0.91
SRFBP1Q8NEF9 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRFBP1Q8NEF9 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRFBP1Q8NEF9 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRFBP1Q8NEF9 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRFBP1Q8NEF9 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SRFBP1Q8NEF9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.75■□□□□ 0.91
SRFBP1Q8NEF9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRFBP1Q8NEF9 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms