Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 AC068587.7-201ENST00000641602 218 ntBASIC22.38■■□□□ 1.17
ATPAF2Q8N5M1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ATPAF2Q8N5M1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
ATPAF2Q8N5M1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
ATPAF2Q8N5M1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
ATPAF2Q8N5M1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ATPAF2Q8N5M1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ATPAF2Q8N5M1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
ATPAF2Q8N5M1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ATPAF2Q8N5M1 AL117328.2-201ENST00000624617 1940 ntBASIC22.37■■□□□ 1.17
ATPAF2Q8N5M1 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
ATPAF2Q8N5M1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
ATPAF2Q8N5M1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.37■■□□□ 1.17
ATPAF2Q8N5M1 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ATPAF2Q8N5M1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ATPAF2Q8N5M1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.37■■□□□ 1.17
ATPAF2Q8N5M1 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.37■■□□□ 1.17
ATPAF2Q8N5M1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ATPAF2Q8N5M1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.36■■□□□ 1.17
ATPAF2Q8N5M1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ATPAF2Q8N5M1 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.36■■□□□ 1.17
ATPAF2Q8N5M1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATPAF2Q8N5M1 BX842568.3-201ENST00000418104 571 ntBASIC22.36■■□□□ 1.17
ATPAF2Q8N5M1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.36■■□□□ 1.17
ATPAF2Q8N5M1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.36■■□□□ 1.17
ATPAF2Q8N5M1 AL139246.5-201ENST00000606645 996 ntBASIC22.36■■□□□ 1.17
ATPAF2Q8N5M1 CA15P2-201ENST00000611168 834 ntBASIC22.36■■□□□ 1.17
ATPAF2Q8N5M1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
ATPAF2Q8N5M1 AC087239.1-201ENST00000622671 572 ntBASIC22.36■■□□□ 1.17
ATPAF2Q8N5M1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
ATPAF2Q8N5M1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ATPAF2Q8N5M1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATPAF2Q8N5M1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATPAF2Q8N5M1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ATPAF2Q8N5M1 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ATPAF2Q8N5M1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATPAF2Q8N5M1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.35■■□□□ 1.17
ATPAF2Q8N5M1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATPAF2Q8N5M1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATPAF2Q8N5M1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATPAF2Q8N5M1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
ATPAF2Q8N5M1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATPAF2Q8N5M1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATPAF2Q8N5M1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ATPAF2Q8N5M1 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.35■■□□□ 1.17
ATPAF2Q8N5M1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.35■■□□□ 1.17
ATPAF2Q8N5M1 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATPAF2Q8N5M1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
ATPAF2Q8N5M1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ATPAF2Q8N5M1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ATPAF2Q8N5M1 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ATPAF2Q8N5M1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
ATPAF2Q8N5M1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ATPAF2Q8N5M1 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.34■■□□□ 1.17
ATPAF2Q8N5M1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.34■■□□□ 1.17
ATPAF2Q8N5M1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
ATPAF2Q8N5M1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ATPAF2Q8N5M1 AC137767.1-201ENST00000602918 1920 ntBASIC22.33■■□□□ 1.17
ATPAF2Q8N5M1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
ATPAF2Q8N5M1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ATPAF2Q8N5M1 AC080038.3-201ENST00000623346 1952 ntBASIC22.33■■□□□ 1.17
ATPAF2Q8N5M1 EDA-201ENST00000338901 1233 ntBASIC22.33■■□□□ 1.17
ATPAF2Q8N5M1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.33■■□□□ 1.17
ATPAF2Q8N5M1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.33■■□□□ 1.17
ATPAF2Q8N5M1 AC233992.3-201ENST00000607491 485 ntBASIC22.33■■□□□ 1.17
ATPAF2Q8N5M1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
ATPAF2Q8N5M1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ATPAF2Q8N5M1 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
ATPAF2Q8N5M1 AC242852.2-201ENST00000615738 1807 ntBASIC22.33■■□□□ 1.16
ATPAF2Q8N5M1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
ATPAF2Q8N5M1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
ATPAF2Q8N5M1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
ATPAF2Q8N5M1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
ATPAF2Q8N5M1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.32■■□□□ 1.16
ATPAF2Q8N5M1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.32■■□□□ 1.16
ATPAF2Q8N5M1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
ATPAF2Q8N5M1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.32■■□□□ 1.16
ATPAF2Q8N5M1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
ATPAF2Q8N5M1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.32■■□□□ 1.16
ATPAF2Q8N5M1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
ATPAF2Q8N5M1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.31■■□□□ 1.16
ATPAF2Q8N5M1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
ATPAF2Q8N5M1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
ATPAF2Q8N5M1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ATPAF2Q8N5M1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
ATPAF2Q8N5M1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.31■■□□□ 1.16
ATPAF2Q8N5M1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.31■■□□□ 1.16
ATPAF2Q8N5M1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
ATPAF2Q8N5M1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
ATPAF2Q8N5M1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.31■■□□□ 1.16
ATPAF2Q8N5M1 AP005435.1-201ENST00000529293 1178 ntBASIC22.31■■□□□ 1.16
ATPAF2Q8N5M1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.31■■□□□ 1.16
ATPAF2Q8N5M1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
ATPAF2Q8N5M1 AC008764.7-201ENST00000593779 1081 ntBASIC22.31■■□□□ 1.16
ATPAF2Q8N5M1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
ATPAF2Q8N5M1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
ATPAF2Q8N5M1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
ATPAF2Q8N5M1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ATPAF2Q8N5M1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ATPAF2Q8N5M1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms