Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
ARHGEF28Q8N1W1 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
ARHGEF28Q8N1W1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC30.64■■■□□ 2.5
ARHGEF28Q8N1W1 AC005224.4-201ENST00000583262 1652 ntBASIC30.64■■■□□ 2.5
ARHGEF28Q8N1W1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC30.64■■■□□ 2.5
ARHGEF28Q8N1W1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC30.64■■■□□ 2.5
ARHGEF28Q8N1W1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
ARHGEF28Q8N1W1 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
ARHGEF28Q8N1W1 ID1-201ENST00000376105 1233 ntBASIC30.64■■■□□ 2.5
ARHGEF28Q8N1W1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
ARHGEF28Q8N1W1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC30.63■■■□□ 2.49
ARHGEF28Q8N1W1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
ARHGEF28Q8N1W1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
ARHGEF28Q8N1W1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC30.63■■■□□ 2.49
ARHGEF28Q8N1W1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
ARHGEF28Q8N1W1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
ARHGEF28Q8N1W1 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
ARHGEF28Q8N1W1 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
ARHGEF28Q8N1W1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC30.62■■■□□ 2.49
ARHGEF28Q8N1W1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
ARHGEF28Q8N1W1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC30.62■■■□□ 2.49
ARHGEF28Q8N1W1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC30.62■■■□□ 2.49
ARHGEF28Q8N1W1 LINC01960-201ENST00000563759 1884 ntBASIC30.62■■■□□ 2.49
ARHGEF28Q8N1W1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC30.62■■■□□ 2.49
ARHGEF28Q8N1W1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC30.61■■■□□ 2.49
ARHGEF28Q8N1W1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC30.61■■■□□ 2.49
ARHGEF28Q8N1W1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC30.61■■■□□ 2.49
ARHGEF28Q8N1W1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
ARHGEF28Q8N1W1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
ARHGEF28Q8N1W1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC30.6■■■□□ 2.49
ARHGEF28Q8N1W1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC30.6■■■□□ 2.49
ARHGEF28Q8N1W1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC30.6■■■□□ 2.49
ARHGEF28Q8N1W1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC30.6■■■□□ 2.49
ARHGEF28Q8N1W1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC30.6■■■□□ 2.49
ARHGEF28Q8N1W1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
ARHGEF28Q8N1W1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
ARHGEF28Q8N1W1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC30.59■■■□□ 2.49
ARHGEF28Q8N1W1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC30.59■■■□□ 2.49
ARHGEF28Q8N1W1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
ARHGEF28Q8N1W1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
ARHGEF28Q8N1W1 KRT87P-202ENST00000534226 1464 ntBASIC30.58■■■□□ 2.49
ARHGEF28Q8N1W1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC30.58■■■□□ 2.49
ARHGEF28Q8N1W1 OXCT2P1-201ENST00000447263 1535 ntBASIC30.58■■■□□ 2.49
ARHGEF28Q8N1W1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC30.58■■■□□ 2.49
ARHGEF28Q8N1W1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
ARHGEF28Q8N1W1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
ARHGEF28Q8N1W1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC30.58■■■□□ 2.49
ARHGEF28Q8N1W1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
ARHGEF28Q8N1W1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC30.57■■■□□ 2.48
ARHGEF28Q8N1W1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC30.57■■■□□ 2.48
ARHGEF28Q8N1W1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
ARHGEF28Q8N1W1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC30.56■■■□□ 2.48
ARHGEF28Q8N1W1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
ARHGEF28Q8N1W1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
ARHGEF28Q8N1W1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
ARHGEF28Q8N1W1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
ARHGEF28Q8N1W1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
ARHGEF28Q8N1W1 CDCA4P2-201ENST00000441182 718 ntBASIC30.56■■■□□ 2.48
ARHGEF28Q8N1W1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC30.56■■■□□ 2.48
ARHGEF28Q8N1W1 GAS2L1P2-201ENST00000436355 1356 ntBASIC30.55■■■□□ 2.48
ARHGEF28Q8N1W1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
ARHGEF28Q8N1W1 MIR663A-201ENST00000385250 93 ntBASIC30.55■■■□□ 2.48
ARHGEF28Q8N1W1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC30.55■■■□□ 2.48
ARHGEF28Q8N1W1 KRT19P1-201ENST00000405746 1186 ntBASIC30.55■■■□□ 2.48
ARHGEF28Q8N1W1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC30.55■■■□□ 2.48
ARHGEF28Q8N1W1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC30.55■■■□□ 2.48
ARHGEF28Q8N1W1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
ARHGEF28Q8N1W1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
ARHGEF28Q8N1W1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
ARHGEF28Q8N1W1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC30.54■■■□□ 2.48
ARHGEF28Q8N1W1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
ARHGEF28Q8N1W1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
ARHGEF28Q8N1W1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC30.54■■■□□ 2.48
ARHGEF28Q8N1W1 HLA-L-209ENST00000420110 1011 ntBASIC30.54■■■□□ 2.48
ARHGEF28Q8N1W1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC30.54■■■□□ 2.48
ARHGEF28Q8N1W1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
ARHGEF28Q8N1W1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
ARHGEF28Q8N1W1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
ARHGEF28Q8N1W1 AC079140.4-201ENST00000507448 529 ntBASIC30.53■■■□□ 2.48
ARHGEF28Q8N1W1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC30.53■■■□□ 2.48
ARHGEF28Q8N1W1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
ARHGEF28Q8N1W1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
ARHGEF28Q8N1W1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
ARHGEF28Q8N1W1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
ARHGEF28Q8N1W1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC30.53■■■□□ 2.48
ARHGEF28Q8N1W1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC30.53■■■□□ 2.48
ARHGEF28Q8N1W1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
ARHGEF28Q8N1W1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
ARHGEF28Q8N1W1 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
ARHGEF28Q8N1W1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
ARHGEF28Q8N1W1 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
ARHGEF28Q8N1W1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
ARHGEF28Q8N1W1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
ARHGEF28Q8N1W1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
ARHGEF28Q8N1W1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
ARHGEF28Q8N1W1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
ARHGEF28Q8N1W1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC30.52■■■□□ 2.48
ARHGEF28Q8N1W1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
ARHGEF28Q8N1W1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
ARHGEF28Q8N1W1 AC080038.1-201ENST00000611274 1154 ntBASIC30.52■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms