Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD2Q8IV50 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD2Q8IV50 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.18■□□□□ 0.66
LYSMD2Q8IV50 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
LYSMD2Q8IV50 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.18■□□□□ 0.66
LYSMD2Q8IV50 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD2Q8IV50 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.18■□□□□ 0.66
LYSMD2Q8IV50 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.18■□□□□ 0.66
LYSMD2Q8IV50 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD2Q8IV50 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.18■□□□□ 0.66
LYSMD2Q8IV50 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD2Q8IV50 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.17■□□□□ 0.66
LYSMD2Q8IV50 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD2Q8IV50 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD2Q8IV50 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD2Q8IV50 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LYSMD2Q8IV50 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.17■□□□□ 0.66
LYSMD2Q8IV50 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.17■□□□□ 0.66
LYSMD2Q8IV50 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD2Q8IV50 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LYSMD2Q8IV50 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD2Q8IV50 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD2Q8IV50 FEM1AP4-201ENST00000443167 1987 ntBASIC19.17■□□□□ 0.66
LYSMD2Q8IV50 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD2Q8IV50 AC090877.2-201ENST00000558441 1738 ntBASIC19.17■□□□□ 0.66
LYSMD2Q8IV50 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD2Q8IV50 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD2Q8IV50 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LYSMD2Q8IV50 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
LYSMD2Q8IV50 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LYSMD2Q8IV50 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LYSMD2Q8IV50 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LYSMD2Q8IV50 AC007029.1-201ENST00000604183 313 ntBASIC19.16■□□□□ 0.66
LYSMD2Q8IV50 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.16■□□□□ 0.66
LYSMD2Q8IV50 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LYSMD2Q8IV50 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LYSMD2Q8IV50 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
LYSMD2Q8IV50 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LYSMD2Q8IV50 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
LYSMD2Q8IV50 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.15■□□□□ 0.66
LYSMD2Q8IV50 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LYSMD2Q8IV50 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.15■□□□□ 0.66
LYSMD2Q8IV50 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LYSMD2Q8IV50 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.15■□□□□ 0.66
LYSMD2Q8IV50 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.15■□□□□ 0.66
LYSMD2Q8IV50 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LYSMD2Q8IV50 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LYSMD2Q8IV50 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
LYSMD2Q8IV50 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.15■□□□□ 0.66
LYSMD2Q8IV50 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.15■□□□□ 0.66
LYSMD2Q8IV50 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LYSMD2Q8IV50 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LYSMD2Q8IV50 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
LYSMD2Q8IV50 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
LYSMD2Q8IV50 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LYSMD2Q8IV50 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LYSMD2Q8IV50 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LYSMD2Q8IV50 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LYSMD2Q8IV50 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.14■□□□□ 0.65
LYSMD2Q8IV50 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.14■□□□□ 0.65
LYSMD2Q8IV50 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LYSMD2Q8IV50 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LYSMD2Q8IV50 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LYSMD2Q8IV50 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LYSMD2Q8IV50 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LYSMD2Q8IV50 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LYSMD2Q8IV50 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LYSMD2Q8IV50 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
LYSMD2Q8IV50 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LYSMD2Q8IV50 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
LYSMD2Q8IV50 Z98882.1-201ENST00000622160 2253 ntBASIC19.13■□□□□ 0.65
LYSMD2Q8IV50 AL020996.1-203ENST00000536896 2307 ntBASIC19.13■□□□□ 0.65
LYSMD2Q8IV50 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LYSMD2Q8IV50 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LYSMD2Q8IV50 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LYSMD2Q8IV50 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
LYSMD2Q8IV50 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LYSMD2Q8IV50 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.13■□□□□ 0.65
LYSMD2Q8IV50 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
LYSMD2Q8IV50 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
LYSMD2Q8IV50 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.12■□□□□ 0.65
LYSMD2Q8IV50 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LYSMD2Q8IV50 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
LYSMD2Q8IV50 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LYSMD2Q8IV50 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.12■□□□□ 0.65
LYSMD2Q8IV50 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.12■□□□□ 0.65
LYSMD2Q8IV50 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LYSMD2Q8IV50 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LYSMD2Q8IV50 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LYSMD2Q8IV50 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.12■□□□□ 0.65
LYSMD2Q8IV50 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
LYSMD2Q8IV50 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LYSMD2Q8IV50 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.12■□□□□ 0.65
LYSMD2Q8IV50 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.12■□□□□ 0.65
LYSMD2Q8IV50 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LYSMD2Q8IV50 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LYSMD2Q8IV50 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LYSMD2Q8IV50 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LYSMD2Q8IV50 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LYSMD2Q8IV50 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms