Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.19■□□□□ 0.82
VRK2Q86Y07 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.19■□□□□ 0.82
VRK2Q86Y07 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.19■□□□□ 0.82
VRK2Q86Y07 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VRK2Q86Y07 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VRK2Q86Y07 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.19■□□□□ 0.82
VRK2Q86Y07 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VRK2Q86Y07 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VRK2Q86Y07 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.19■□□□□ 0.82
VRK2Q86Y07 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
VRK2Q86Y07 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.19■□□□□ 0.82
VRK2Q86Y07 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VRK2Q86Y07 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
VRK2Q86Y07 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VRK2Q86Y07 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
VRK2Q86Y07 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
VRK2Q86Y07 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.19■□□□□ 0.82
VRK2Q86Y07 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VRK2Q86Y07 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.19■□□□□ 0.82
VRK2Q86Y07 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VRK2Q86Y07 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
VRK2Q86Y07 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
VRK2Q86Y07 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VRK2Q86Y07 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.18■□□□□ 0.82
VRK2Q86Y07 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.18■□□□□ 0.82
VRK2Q86Y07 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.18■□□□□ 0.82
VRK2Q86Y07 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VRK2Q86Y07 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VRK2Q86Y07 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.17■□□□□ 0.82
VRK2Q86Y07 AC133637.1-201ENST00000624115 1537 ntBASIC20.17■□□□□ 0.82
VRK2Q86Y07 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
VRK2Q86Y07 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VRK2Q86Y07 AL356441.2-201ENST00000443009 864 ntBASIC20.17■□□□□ 0.82
VRK2Q86Y07 CA15P2-201ENST00000611168 834 ntBASIC20.17■□□□□ 0.82
VRK2Q86Y07 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.17■□□□□ 0.82
VRK2Q86Y07 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VRK2Q86Y07 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.17■□□□□ 0.82
VRK2Q86Y07 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
VRK2Q86Y07 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
VRK2Q86Y07 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
VRK2Q86Y07 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
VRK2Q86Y07 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
VRK2Q86Y07 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.16■□□□□ 0.82
VRK2Q86Y07 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
VRK2Q86Y07 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
VRK2Q86Y07 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VRK2Q86Y07 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
VRK2Q86Y07 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
VRK2Q86Y07 AL512631.2-201ENST00000604634 923 ntBASIC20.16■□□□□ 0.82
VRK2Q86Y07 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
VRK2Q86Y07 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VRK2Q86Y07 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
VRK2Q86Y07 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
VRK2Q86Y07 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VRK2Q86Y07 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
VRK2Q86Y07 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
VRK2Q86Y07 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VRK2Q86Y07 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
VRK2Q86Y07 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VRK2Q86Y07 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.15■□□□□ 0.82
VRK2Q86Y07 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
VRK2Q86Y07 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
VRK2Q86Y07 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
VRK2Q86Y07 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.14■□□□□ 0.81
VRK2Q86Y07 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
VRK2Q86Y07 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.14■□□□□ 0.81
VRK2Q86Y07 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VRK2Q86Y07 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.14■□□□□ 0.81
VRK2Q86Y07 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.14■□□□□ 0.81
VRK2Q86Y07 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VRK2Q86Y07 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VRK2Q86Y07 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.14■□□□□ 0.81
VRK2Q86Y07 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VRK2Q86Y07 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.13■□□□□ 0.81
VRK2Q86Y07 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.13■□□□□ 0.81
VRK2Q86Y07 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VRK2Q86Y07 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.13■□□□□ 0.81
VRK2Q86Y07 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.13■□□□□ 0.81
VRK2Q86Y07 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VRK2Q86Y07 FBXW4P1-201ENST00000426721 2239 ntBASIC20.13■□□□□ 0.81
VRK2Q86Y07 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VRK2Q86Y07 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VRK2Q86Y07 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VRK2Q86Y07 SRD5A1P1-201ENST00000442297 786 ntBASIC20.13■□□□□ 0.81
VRK2Q86Y07 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.13■□□□□ 0.81
VRK2Q86Y07 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VRK2Q86Y07 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
VRK2Q86Y07 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VRK2Q86Y07 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
VRK2Q86Y07 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VRK2Q86Y07 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
VRK2Q86Y07 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
VRK2Q86Y07 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VRK2Q86Y07 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VRK2Q86Y07 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
VRK2Q86Y07 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VRK2Q86Y07 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VRK2Q86Y07 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.12■□□□□ 0.81
VRK2Q86Y07 MIR3181-201ENST00000578512 73 ntBASIC20.12■□□□□ 0.81
VRK2Q86Y07 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms