Protein–RNA interactions for Protein: Q7RTT6

SSX6, Putative protein SSX6, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX6Q7RTT6 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SSX6Q7RTT6 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SSX6Q7RTT6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SSX6Q7RTT6 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SSX6Q7RTT6 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SSX6Q7RTT6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSX6Q7RTT6 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSX6Q7RTT6 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.44■□□□□ 0.7
SSX6Q7RTT6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.44■□□□□ 0.7
SSX6Q7RTT6 MIR6722-201ENST00000617286 78 ntBASIC19.44■□□□□ 0.7
SSX6Q7RTT6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.44■□□□□ 0.7
SSX6Q7RTT6 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSX6Q7RTT6 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.44■□□□□ 0.7
SSX6Q7RTT6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSX6Q7RTT6 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSX6Q7RTT6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SSX6Q7RTT6 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSX6Q7RTT6 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SSX6Q7RTT6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SSX6Q7RTT6 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX6Q7RTT6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SSX6Q7RTT6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.43■□□□□ 0.7
SSX6Q7RTT6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX6Q7RTT6 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX6Q7RTT6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.43■□□□□ 0.7
SSX6Q7RTT6 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.43■□□□□ 0.7
SSX6Q7RTT6 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.43■□□□□ 0.7
SSX6Q7RTT6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SSX6Q7RTT6 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX6Q7RTT6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SSX6Q7RTT6 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX6Q7RTT6 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX6Q7RTT6 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX6Q7RTT6 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX6Q7RTT6 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SSX6Q7RTT6 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX6Q7RTT6 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX6Q7RTT6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX6Q7RTT6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SSX6Q7RTT6 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX6Q7RTT6 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX6Q7RTT6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX6Q7RTT6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.42■□□□□ 0.7
SSX6Q7RTT6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.42■□□□□ 0.7
SSX6Q7RTT6 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SSX6Q7RTT6 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SSX6Q7RTT6 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX6Q7RTT6 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX6Q7RTT6 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX6Q7RTT6 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SSX6Q7RTT6 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.42■□□□□ 0.7
SSX6Q7RTT6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
SSX6Q7RTT6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX6Q7RTT6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX6Q7RTT6 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SSX6Q7RTT6 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.42■□□□□ 0.7
SSX6Q7RTT6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX6Q7RTT6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SSX6Q7RTT6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SSX6Q7RTT6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
SSX6Q7RTT6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SSX6Q7RTT6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.42■□□□□ 0.7
SSX6Q7RTT6 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSX6Q7RTT6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.41■□□□□ 0.7
SSX6Q7RTT6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSX6Q7RTT6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSX6Q7RTT6 DUX4L4-201ENST00000566884 1269 ntBASIC19.41■□□□□ 0.7
SSX6Q7RTT6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SSX6Q7RTT6 AL031848.2-201ENST00000607670 837 ntBASIC19.41■□□□□ 0.7
SSX6Q7RTT6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSX6Q7RTT6 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSX6Q7RTT6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.41■□□□□ 0.7
SSX6Q7RTT6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.41■□□□□ 0.7
SSX6Q7RTT6 AC021242.3-201ENST00000607598 1377 ntBASIC19.41■□□□□ 0.7
SSX6Q7RTT6 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSX6Q7RTT6 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSX6Q7RTT6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSX6Q7RTT6 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SSX6Q7RTT6 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSX6Q7RTT6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.4■□□□□ 0.7
SSX6Q7RTT6 AC009086.3-201ENST00000623486 1008 ntBASIC19.4■□□□□ 0.7
SSX6Q7RTT6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.4■□□□□ 0.7
SSX6Q7RTT6 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSX6Q7RTT6 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSX6Q7RTT6 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.4■□□□□ 0.7
SSX6Q7RTT6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.4■□□□□ 0.7
SSX6Q7RTT6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
SSX6Q7RTT6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSX6Q7RTT6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.4■□□□□ 0.7
SSX6Q7RTT6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.4■□□□□ 0.7
SSX6Q7RTT6 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SSX6Q7RTT6 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSX6Q7RTT6 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.39■□□□□ 0.7
SSX6Q7RTT6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSX6Q7RTT6 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSX6Q7RTT6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.39■□□□□ 0.69
SSX6Q7RTT6 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.39■□□□□ 0.69
SSX6Q7RTT6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SSX6Q7RTT6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.39■□□□□ 0.69
SSX6Q7RTT6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms