Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTCHD4Q6ZW05 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTCHD4Q6ZW05 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PTCHD4Q6ZW05 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.01■□□□□ 0.79
PTCHD4Q6ZW05 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTCHD4Q6ZW05 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
PTCHD4Q6ZW05 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PTCHD4Q6ZW05 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.01■□□□□ 0.79
PTCHD4Q6ZW05 AC144652.1-201ENST00000609974 1624 ntBASIC20.01■□□□□ 0.79
PTCHD4Q6ZW05 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PTCHD4Q6ZW05 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.01■□□□□ 0.79
PTCHD4Q6ZW05 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
PTCHD4Q6ZW05 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
PTCHD4Q6ZW05 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTCHD4Q6ZW05 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTCHD4Q6ZW05 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTCHD4Q6ZW05 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20■□□□□ 0.79
PTCHD4Q6ZW05 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PTCHD4Q6ZW05 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20■□□□□ 0.79
PTCHD4Q6ZW05 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20■□□□□ 0.79
PTCHD4Q6ZW05 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PTCHD4Q6ZW05 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20■□□□□ 0.79
PTCHD4Q6ZW05 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20■□□□□ 0.79
PTCHD4Q6ZW05 FAM99A-202ENST00000538190 1989 ntBASIC20■□□□□ 0.79
PTCHD4Q6ZW05 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTCHD4Q6ZW05 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20■□□□□ 0.79
PTCHD4Q6ZW05 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
PTCHD4Q6ZW05 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTCHD4Q6ZW05 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTCHD4Q6ZW05 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.99■□□□□ 0.79
PTCHD4Q6ZW05 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTCHD4Q6ZW05 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTCHD4Q6ZW05 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
PTCHD4Q6ZW05 AC021242.3-201ENST00000607598 1377 ntBASIC19.99■□□□□ 0.79
PTCHD4Q6ZW05 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTCHD4Q6ZW05 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PTCHD4Q6ZW05 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTCHD4Q6ZW05 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTCHD4Q6ZW05 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.99■□□□□ 0.79
PTCHD4Q6ZW05 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTCHD4Q6ZW05 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.99■□□□□ 0.79
PTCHD4Q6ZW05 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PTCHD4Q6ZW05 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTCHD4Q6ZW05 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.99■□□□□ 0.79
PTCHD4Q6ZW05 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTCHD4Q6ZW05 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTCHD4Q6ZW05 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTCHD4Q6ZW05 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTCHD4Q6ZW05 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTCHD4Q6ZW05 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PTCHD4Q6ZW05 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTCHD4Q6ZW05 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
PTCHD4Q6ZW05 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PTCHD4Q6ZW05 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTCHD4Q6ZW05 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PTCHD4Q6ZW05 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTCHD4Q6ZW05 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.98■□□□□ 0.79
PTCHD4Q6ZW05 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.98■□□□□ 0.79
PTCHD4Q6ZW05 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.98■□□□□ 0.79
PTCHD4Q6ZW05 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.98■□□□□ 0.79
PTCHD4Q6ZW05 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTCHD4Q6ZW05 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTCHD4Q6ZW05 AC010542.4-201ENST00000563151 1910 ntBASIC19.98■□□□□ 0.79
PTCHD4Q6ZW05 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTCHD4Q6ZW05 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.97■□□□□ 0.79
PTCHD4Q6ZW05 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PTCHD4Q6ZW05 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PTCHD4Q6ZW05 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.97■□□□□ 0.79
PTCHD4Q6ZW05 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTCHD4Q6ZW05 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PTCHD4Q6ZW05 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTCHD4Q6ZW05 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PTCHD4Q6ZW05 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTCHD4Q6ZW05 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.97■□□□□ 0.79
PTCHD4Q6ZW05 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTCHD4Q6ZW05 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PTCHD4Q6ZW05 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.97■□□□□ 0.79
PTCHD4Q6ZW05 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTCHD4Q6ZW05 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTCHD4Q6ZW05 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTCHD4Q6ZW05 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PTCHD4Q6ZW05 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTCHD4Q6ZW05 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.96■□□□□ 0.79
PTCHD4Q6ZW05 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTCHD4Q6ZW05 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTCHD4Q6ZW05 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.96■□□□□ 0.79
PTCHD4Q6ZW05 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.96■□□□□ 0.79
PTCHD4Q6ZW05 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.96■□□□□ 0.79
PTCHD4Q6ZW05 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTCHD4Q6ZW05 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.96■□□□□ 0.79
PTCHD4Q6ZW05 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTCHD4Q6ZW05 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.95■□□□□ 0.78
PTCHD4Q6ZW05 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTCHD4Q6ZW05 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTCHD4Q6ZW05 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.95■□□□□ 0.78
PTCHD4Q6ZW05 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTCHD4Q6ZW05 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTCHD4Q6ZW05 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PTCHD4Q6ZW05 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTCHD4Q6ZW05 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms