Protein–RNA interactions for Protein: Q6P1A2

LPCAT3, Lysophospholipid acyltransferase 5, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3Q6P1A2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LPCAT3Q6P1A2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LPCAT3Q6P1A2 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LPCAT3Q6P1A2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LPCAT3Q6P1A2 KRT18P24-201ENST00000344739 1156 ntBASIC18.36■□□□□ 0.53
LPCAT3Q6P1A2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LPCAT3Q6P1A2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LPCAT3Q6P1A2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
LPCAT3Q6P1A2 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LPCAT3Q6P1A2 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
LPCAT3Q6P1A2 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LPCAT3Q6P1A2 LINC01521-201ENST00000504184 1943 ntBASIC18.36■□□□□ 0.53
LPCAT3Q6P1A2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.36■□□□□ 0.53
LPCAT3Q6P1A2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LPCAT3Q6P1A2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.36■□□□□ 0.53
LPCAT3Q6P1A2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LPCAT3Q6P1A2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LPCAT3Q6P1A2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LPCAT3Q6P1A2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.35■□□□□ 0.53
LPCAT3Q6P1A2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LPCAT3Q6P1A2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LPCAT3Q6P1A2 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.35■□□□□ 0.53
LPCAT3Q6P1A2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
LPCAT3Q6P1A2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
LPCAT3Q6P1A2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
LPCAT3Q6P1A2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.34■□□□□ 0.53
LPCAT3Q6P1A2 AC144652.1-201ENST00000609974 1624 ntBASIC18.34■□□□□ 0.53
LPCAT3Q6P1A2 AF131216.4-201ENST00000638924 1588 ntBASIC18.34■□□□□ 0.53
LPCAT3Q6P1A2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LPCAT3Q6P1A2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LPCAT3Q6P1A2 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
LPCAT3Q6P1A2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
LPCAT3Q6P1A2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
LPCAT3Q6P1A2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
LPCAT3Q6P1A2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LPCAT3Q6P1A2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LPCAT3Q6P1A2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LPCAT3Q6P1A2 THA1P-201ENST00000590384 1145 ntBASIC18.34■□□□□ 0.53
LPCAT3Q6P1A2 U85056.1-201ENST00000616429 682 ntBASIC18.34■□□□□ 0.53
LPCAT3Q6P1A2 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LPCAT3Q6P1A2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LPCAT3Q6P1A2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
LPCAT3Q6P1A2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LPCAT3Q6P1A2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LPCAT3Q6P1A2 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LPCAT3Q6P1A2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
LPCAT3Q6P1A2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LPCAT3Q6P1A2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.33■□□□□ 0.53
LPCAT3Q6P1A2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
LPCAT3Q6P1A2 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
LPCAT3Q6P1A2 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
LPCAT3Q6P1A2 AC087742.1-201ENST00000575880 1738 ntBASIC18.33■□□□□ 0.52
LPCAT3Q6P1A2 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LPCAT3Q6P1A2 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.33■□□□□ 0.52
LPCAT3Q6P1A2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.33■□□□□ 0.52
LPCAT3Q6P1A2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
LPCAT3Q6P1A2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.33■□□□□ 0.52
LPCAT3Q6P1A2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LPCAT3Q6P1A2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LPCAT3Q6P1A2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.33■□□□□ 0.52
LPCAT3Q6P1A2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LPCAT3Q6P1A2 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.32■□□□□ 0.52
LPCAT3Q6P1A2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.32■□□□□ 0.52
LPCAT3Q6P1A2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LPCAT3Q6P1A2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
LPCAT3Q6P1A2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
LPCAT3Q6P1A2 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LPCAT3Q6P1A2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LPCAT3Q6P1A2 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LPCAT3Q6P1A2 RARRES2P2-201ENST00000394842 485 ntBASIC18.32■□□□□ 0.52
LPCAT3Q6P1A2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.32■□□□□ 0.52
LPCAT3Q6P1A2 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LPCAT3Q6P1A2 AC244015.2-201ENST00000616358 1861 ntBASIC18.32■□□□□ 0.52
LPCAT3Q6P1A2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
LPCAT3Q6P1A2 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LPCAT3Q6P1A2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LPCAT3Q6P1A2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LPCAT3Q6P1A2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LPCAT3Q6P1A2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LPCAT3Q6P1A2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LPCAT3Q6P1A2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LPCAT3Q6P1A2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.31■□□□□ 0.52
LPCAT3Q6P1A2 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LPCAT3Q6P1A2 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LPCAT3Q6P1A2 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.31■□□□□ 0.52
LPCAT3Q6P1A2 MIR4281-201ENST00000580852 62 ntBASIC18.31■□□□□ 0.52
LPCAT3Q6P1A2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.31■□□□□ 0.52
LPCAT3Q6P1A2 AC074183.2-201ENST00000623112 922 ntBASIC18.31■□□□□ 0.52
LPCAT3Q6P1A2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.31■□□□□ 0.52
LPCAT3Q6P1A2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LPCAT3Q6P1A2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LPCAT3Q6P1A2 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LPCAT3Q6P1A2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LPCAT3Q6P1A2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LPCAT3Q6P1A2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LPCAT3Q6P1A2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LPCAT3Q6P1A2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.3■□□□□ 0.52
LPCAT3Q6P1A2 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LPCAT3Q6P1A2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.3■□□□□ 0.52
LPCAT3Q6P1A2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms