Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC14.92□□□□□ -0.02
VPS13DQ5THJ4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC14.92□□□□□ -0.02
VPS13DQ5THJ4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
VPS13DQ5THJ4 MARS-234ENST00000630571 216 ntTSL 5 BASIC14.92□□□□□ -0.02
VPS13DQ5THJ4 MARS-235ENST00000630803 183 ntTSL 3 BASIC14.92□□□□□ -0.02
VPS13DQ5THJ4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS13DQ5THJ4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.92□□□□□ -0.02
VPS13DQ5THJ4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS13DQ5THJ4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VPS13DQ5THJ4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC14.91□□□□□ -0.02
VPS13DQ5THJ4 AC005181.1-201ENST00000604782 1256 ntBASIC14.91□□□□□ -0.02
VPS13DQ5THJ4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS13DQ5THJ4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS13DQ5THJ4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS13DQ5THJ4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
VPS13DQ5THJ4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14.91□□□□□ -0.02
VPS13DQ5THJ4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.91□□□□□ -0.02
VPS13DQ5THJ4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VPS13DQ5THJ4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
VPS13DQ5THJ4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VPS13DQ5THJ4 TMEM191A-211ENST00000637163 1067 ntBASIC14.91□□□□□ -0.02
VPS13DQ5THJ4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC14.91□□□□□ -0.02
VPS13DQ5THJ4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS13DQ5THJ4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS13DQ5THJ4 AC004687.1-201ENST00000579003 1625 ntBASIC14.9□□□□□ -0.02
VPS13DQ5THJ4 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS13DQ5THJ4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
VPS13DQ5THJ4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
VPS13DQ5THJ4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
VPS13DQ5THJ4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC14.89□□□□□ -0.03
VPS13DQ5THJ4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS13DQ5THJ4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS13DQ5THJ4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS13DQ5THJ4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS13DQ5THJ4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS13DQ5THJ4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS13DQ5THJ4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS13DQ5THJ4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS13DQ5THJ4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC14.89□□□□□ -0.03
VPS13DQ5THJ4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS13DQ5THJ4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VPS13DQ5THJ4 DUSP8P5-201ENST00000422884 1815 ntBASIC14.89□□□□□ -0.03
VPS13DQ5THJ4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC14.88□□□□□ -0.03
VPS13DQ5THJ4 LINC01529-204ENST00000636474 1715 ntBASIC14.88□□□□□ -0.03
VPS13DQ5THJ4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VPS13DQ5THJ4 AC073210.2-201ENST00000430369 194 ntBASIC14.88□□□□□ -0.03
VPS13DQ5THJ4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
VPS13DQ5THJ4 AC004812.2-201ENST00000611079 2094 ntBASIC14.88□□□□□ -0.03
VPS13DQ5THJ4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS13DQ5THJ4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC14.88□□□□□ -0.03
VPS13DQ5THJ4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS13DQ5THJ4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC14.88□□□□□ -0.03
VPS13DQ5THJ4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS13DQ5THJ4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS13DQ5THJ4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VPS13DQ5THJ4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
VPS13DQ5THJ4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VPS13DQ5THJ4 APTR-205ENST00000447009 902 ntTSL 2 BASIC14.87□□□□□ -0.03
VPS13DQ5THJ4 AC007322.4-201ENST00000509611 723 ntBASIC14.87□□□□□ -0.03
VPS13DQ5THJ4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS13DQ5THJ4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VPS13DQ5THJ4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
VPS13DQ5THJ4 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
VPS13DQ5THJ4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS13DQ5THJ4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VPS13DQ5THJ4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.87□□□□□ -0.03
VPS13DQ5THJ4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC14.87□□□□□ -0.03
VPS13DQ5THJ4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.87□□□□□ -0.03
VPS13DQ5THJ4 TESC-206ENST00000541210 936 ntTSL 3 BASIC14.87□□□□□ -0.03
VPS13DQ5THJ4 AC231657.2-201ENST00000624556 255 ntBASIC14.87□□□□□ -0.03
VPS13DQ5THJ4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC14.87□□□□□ -0.03
VPS13DQ5THJ4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VPS13DQ5THJ4 DUSP8P3-201ENST00000399571 1760 ntBASIC14.87□□□□□ -0.03
VPS13DQ5THJ4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC14.87□□□□□ -0.03
VPS13DQ5THJ4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
VPS13DQ5THJ4 AC010141.3-201ENST00000456659 717 ntBASIC14.87□□□□□ -0.03
VPS13DQ5THJ4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC14.87□□□□□ -0.03
VPS13DQ5THJ4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC14.87□□□□□ -0.03
VPS13DQ5THJ4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS13DQ5THJ4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC14.87□□□□□ -0.03
VPS13DQ5THJ4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
VPS13DQ5THJ4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS13DQ5THJ4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VPS13DQ5THJ4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VPS13DQ5THJ4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC14.86□□□□□ -0.03
VPS13DQ5THJ4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.86□□□□□ -0.03
VPS13DQ5THJ4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VPS13DQ5THJ4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS13DQ5THJ4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VPS13DQ5THJ4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS13DQ5THJ4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC14.86□□□□□ -0.03
VPS13DQ5THJ4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS13DQ5THJ4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC14.86□□□□□ -0.03
VPS13DQ5THJ4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS13DQ5THJ4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC14.85□□□□□ -0.03
VPS13DQ5THJ4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VPS13DQ5THJ4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC14.85□□□□□ -0.03
VPS13DQ5THJ4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC14.85□□□□□ -0.03
VPS13DQ5THJ4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC14.85□□□□□ -0.03
VPS13DQ5THJ4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms