Protein–RNA interactions for Protein: Q49AH0

CDNF, Cerebral dopamine neurotrophic factor, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDNFQ49AH0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDNFQ49AH0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDNFQ49AH0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDNFQ49AH0 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDNFQ49AH0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDNFQ49AH0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDNFQ49AH0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDNFQ49AH0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDNFQ49AH0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDNFQ49AH0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.69■□□□□ 0.58
CDNFQ49AH0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.69■□□□□ 0.58
CDNFQ49AH0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDNFQ49AH0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDNFQ49AH0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CDNFQ49AH0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDNFQ49AH0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDNFQ49AH0 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDNFQ49AH0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDNFQ49AH0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDNFQ49AH0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDNFQ49AH0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDNFQ49AH0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.69■□□□□ 0.58
CDNFQ49AH0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CDNFQ49AH0 AC010542.4-201ENST00000563151 1910 ntBASIC18.68■□□□□ 0.58
CDNFQ49AH0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CDNFQ49AH0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.68■□□□□ 0.58
CDNFQ49AH0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDNFQ49AH0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDNFQ49AH0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CDNFQ49AH0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDNFQ49AH0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CDNFQ49AH0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.68■□□□□ 0.58
CDNFQ49AH0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.68■□□□□ 0.58
CDNFQ49AH0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.68■□□□□ 0.58
CDNFQ49AH0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDNFQ49AH0 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDNFQ49AH0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDNFQ49AH0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDNFQ49AH0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.68■□□□□ 0.58
CDNFQ49AH0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDNFQ49AH0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CDNFQ49AH0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDNFQ49AH0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDNFQ49AH0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.67■□□□□ 0.58
CDNFQ49AH0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDNFQ49AH0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDNFQ49AH0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDNFQ49AH0 LINC01529-204ENST00000636474 1715 ntBASIC18.67■□□□□ 0.58
CDNFQ49AH0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDNFQ49AH0 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDNFQ49AH0 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.67■□□□□ 0.58
CDNFQ49AH0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CDNFQ49AH0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CDNFQ49AH0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.67■□□□□ 0.58
CDNFQ49AH0 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDNFQ49AH0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.66■□□□□ 0.58
CDNFQ49AH0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDNFQ49AH0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDNFQ49AH0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDNFQ49AH0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.66■□□□□ 0.58
CDNFQ49AH0 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDNFQ49AH0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.66■□□□□ 0.58
CDNFQ49AH0 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.66■□□□□ 0.58
CDNFQ49AH0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.66■□□□□ 0.58
CDNFQ49AH0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDNFQ49AH0 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.65■□□□□ 0.58
CDNFQ49AH0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.65■□□□□ 0.58
CDNFQ49AH0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDNFQ49AH0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDNFQ49AH0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.65■□□□□ 0.58
CDNFQ49AH0 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDNFQ49AH0 PVT1_1.1-201ENST00000615125 194 ntBASIC18.65■□□□□ 0.58
CDNFQ49AH0 AC074183.2-201ENST00000623112 922 ntBASIC18.65■□□□□ 0.58
CDNFQ49AH0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.65■□□□□ 0.58
CDNFQ49AH0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDNFQ49AH0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.65■□□□□ 0.58
CDNFQ49AH0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDNFQ49AH0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDNFQ49AH0 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.65■□□□□ 0.58
CDNFQ49AH0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDNFQ49AH0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.64■□□□□ 0.58
CDNFQ49AH0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDNFQ49AH0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDNFQ49AH0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CDNFQ49AH0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDNFQ49AH0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
CDNFQ49AH0 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDNFQ49AH0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.64■□□□□ 0.57
CDNFQ49AH0 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.64■□□□□ 0.57
CDNFQ49AH0 FP325331.1-202ENST00000623531 1380 ntBASIC18.64■□□□□ 0.57
CDNFQ49AH0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDNFQ49AH0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.64■□□□□ 0.57
CDNFQ49AH0 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CDNFQ49AH0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
CDNFQ49AH0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CDNFQ49AH0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDNFQ49AH0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDNFQ49AH0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDNFQ49AH0 LINC01960-201ENST00000563759 1884 ntBASIC18.63■□□□□ 0.57
CDNFQ49AH0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms