Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC25.14■■□□□ 1.61
USH1GQ495M9 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
USH1GQ495M9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
USH1GQ495M9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC25.14■■□□□ 1.61
USH1GQ495M9 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
USH1GQ495M9 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC25.14■■□□□ 1.61
USH1GQ495M9 LINC01960-201ENST00000563759 1884 ntBASIC25.13■■□□□ 1.61
USH1GQ495M9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
USH1GQ495M9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
USH1GQ495M9 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC25.13■■□□□ 1.61
USH1GQ495M9 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC25.13■■□□□ 1.61
USH1GQ495M9 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
USH1GQ495M9 LINC02228-203ENST00000641970 1355 ntBASIC25.13■■□□□ 1.61
USH1GQ495M9 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.13■■□□□ 1.61
USH1GQ495M9 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC25.13■■□□□ 1.61
USH1GQ495M9 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
USH1GQ495M9 OXCT2P1-201ENST00000447263 1535 ntBASIC25.12■■□□□ 1.61
USH1GQ495M9 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
USH1GQ495M9 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
USH1GQ495M9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
USH1GQ495M9 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC25.12■■□□□ 1.61
USH1GQ495M9 SMUG1P1-201ENST00000590640 811 ntBASIC25.12■■□□□ 1.61
USH1GQ495M9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC25.12■■□□□ 1.61
USH1GQ495M9 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC25.12■■□□□ 1.61
USH1GQ495M9 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC25.12■■□□□ 1.61
USH1GQ495M9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC25.12■■□□□ 1.61
USH1GQ495M9 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
USH1GQ495M9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
USH1GQ495M9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
USH1GQ495M9 NFE2L3P1-201ENST00000588207 1959 ntBASIC25.12■■□□□ 1.61
USH1GQ495M9 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC25.12■■□□□ 1.61
USH1GQ495M9 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
USH1GQ495M9 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
USH1GQ495M9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
USH1GQ495M9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC25.11■■□□□ 1.61
USH1GQ495M9 KRT18P5-201ENST00000436075 1291 ntBASIC25.11■■□□□ 1.61
USH1GQ495M9 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC25.11■■□□□ 1.61
USH1GQ495M9 KRT18P14-201ENST00000534205 1250 ntBASIC25.11■■□□□ 1.61
USH1GQ495M9 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC25.11■■□□□ 1.61
USH1GQ495M9 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
USH1GQ495M9 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
USH1GQ495M9 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
USH1GQ495M9 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
USH1GQ495M9 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
USH1GQ495M9 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
USH1GQ495M9 TERF1P2-201ENST00000583350 1212 ntBASIC25.1■■□□□ 1.61
USH1GQ495M9 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
USH1GQ495M9 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC25.1■■□□□ 1.61
USH1GQ495M9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
USH1GQ495M9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
USH1GQ495M9 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
USH1GQ495M9 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC25.1■■□□□ 1.61
USH1GQ495M9 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
USH1GQ495M9 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC25.09■■□□□ 1.61
USH1GQ495M9 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC25.09■■□□□ 1.61
USH1GQ495M9 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC25.09■■□□□ 1.61
USH1GQ495M9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
USH1GQ495M9 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC25.09■■□□□ 1.61
USH1GQ495M9 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
USH1GQ495M9 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
USH1GQ495M9 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
USH1GQ495M9 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
USH1GQ495M9 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
USH1GQ495M9 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
USH1GQ495M9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
USH1GQ495M9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
USH1GQ495M9 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
USH1GQ495M9 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC25.08■■□□□ 1.61
USH1GQ495M9 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
USH1GQ495M9 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
USH1GQ495M9 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC25.08■■□□□ 1.61
USH1GQ495M9 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC25.08■■□□□ 1.61
USH1GQ495M9 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
USH1GQ495M9 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
USH1GQ495M9 GLI3-203ENST00000437480 451 ntTSL 2 BASIC25.08■■□□□ 1.61
USH1GQ495M9 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
USH1GQ495M9 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
USH1GQ495M9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC25.08■■□□□ 1.6
USH1GQ495M9 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
USH1GQ495M9 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
USH1GQ495M9 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC25.07■■□□□ 1.6
USH1GQ495M9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC25.07■■□□□ 1.6
USH1GQ495M9 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC25.07■■□□□ 1.6
USH1GQ495M9 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
USH1GQ495M9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC25.07■■□□□ 1.6
USH1GQ495M9 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
USH1GQ495M9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC25.07■■□□□ 1.6
USH1GQ495M9 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
USH1GQ495M9 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
USH1GQ495M9 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
USH1GQ495M9 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC25.07■■□□□ 1.6
USH1GQ495M9 BX005040.4-201ENST00000637145 1518 ntBASIC25.07■■□□□ 1.6
USH1GQ495M9 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
USH1GQ495M9 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
USH1GQ495M9 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
USH1GQ495M9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
USH1GQ495M9 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
USH1GQ495M9 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
USH1GQ495M9 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC25.06■■□□□ 1.6
USH1GQ495M9 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC25.06■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms