Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
EFNB3Q15768 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.65■□□□□ 0.58
EFNB3Q15768 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EFNB3Q15768 DUX4L2-201ENST00000561772 1275 ntBASIC18.65■□□□□ 0.58
EFNB3Q15768 TERF1P2-201ENST00000583350 1212 ntBASIC18.65■□□□□ 0.58
EFNB3Q15768 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
EFNB3Q15768 DUX4L6-201ENST00000626483 1275 ntBASIC18.65■□□□□ 0.58
EFNB3Q15768 DUX4L1-201ENST00000627662 1275 ntBASIC18.65■□□□□ 0.58
EFNB3Q15768 DUX4L8-201ENST00000629013 1275 ntBASIC18.65■□□□□ 0.58
EFNB3Q15768 DUX4L3-201ENST00000630187 1275 ntBASIC18.65■□□□□ 0.58
EFNB3Q15768 DUX4L7-201ENST00000630678 1275 ntBASIC18.65■□□□□ 0.58
EFNB3Q15768 DUX4L5-201ENST00000630834 1275 ntBASIC18.65■□□□□ 0.58
EFNB3Q15768 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFNB3Q15768 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFNB3Q15768 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFNB3Q15768 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFNB3Q15768 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.65■□□□□ 0.58
EFNB3Q15768 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EFNB3Q15768 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
EFNB3Q15768 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
EFNB3Q15768 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFNB3Q15768 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.64■□□□□ 0.57
EFNB3Q15768 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
EFNB3Q15768 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFNB3Q15768 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFNB3Q15768 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.64■□□□□ 0.57
EFNB3Q15768 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.64■□□□□ 0.57
EFNB3Q15768 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.64■□□□□ 0.57
EFNB3Q15768 CCDC92B-201ENST00000575506 885 ntBASIC18.64■□□□□ 0.57
EFNB3Q15768 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.64■□□□□ 0.57
EFNB3Q15768 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFNB3Q15768 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
EFNB3Q15768 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
EFNB3Q15768 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFNB3Q15768 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.63■□□□□ 0.57
EFNB3Q15768 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.63■□□□□ 0.57
EFNB3Q15768 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
EFNB3Q15768 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EFNB3Q15768 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.63■□□□□ 0.57
EFNB3Q15768 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFNB3Q15768 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.63■□□□□ 0.57
EFNB3Q15768 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFNB3Q15768 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFNB3Q15768 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.63■□□□□ 0.57
EFNB3Q15768 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFNB3Q15768 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
EFNB3Q15768 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.62■□□□□ 0.57
EFNB3Q15768 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EFNB3Q15768 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.62■□□□□ 0.57
EFNB3Q15768 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.62■□□□□ 0.57
EFNB3Q15768 SMUG1P1-201ENST00000590640 811 ntBASIC18.62■□□□□ 0.57
EFNB3Q15768 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.62■□□□□ 0.57
EFNB3Q15768 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.62■□□□□ 0.57
EFNB3Q15768 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.62■□□□□ 0.57
EFNB3Q15768 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
EFNB3Q15768 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EFNB3Q15768 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EFNB3Q15768 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.62■□□□□ 0.57
EFNB3Q15768 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
EFNB3Q15768 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
EFNB3Q15768 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.62■□□□□ 0.57
EFNB3Q15768 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
EFNB3Q15768 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFNB3Q15768 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EFNB3Q15768 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
EFNB3Q15768 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
EFNB3Q15768 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.61■□□□□ 0.57
EFNB3Q15768 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EFNB3Q15768 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
EFNB3Q15768 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFNB3Q15768 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFNB3Q15768 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
EFNB3Q15768 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFNB3Q15768 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
EFNB3Q15768 KRT18P14-201ENST00000534205 1250 ntBASIC18.61■□□□□ 0.57
EFNB3Q15768 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.61■□□□□ 0.57
EFNB3Q15768 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFNB3Q15768 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
EFNB3Q15768 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFNB3Q15768 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFNB3Q15768 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFNB3Q15768 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
EFNB3Q15768 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
EFNB3Q15768 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
EFNB3Q15768 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EFNB3Q15768 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EFNB3Q15768 BX005040.4-201ENST00000637145 1518 ntBASIC18.6■□□□□ 0.57
EFNB3Q15768 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EFNB3Q15768 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EFNB3Q15768 KRT18P5-201ENST00000436075 1291 ntBASIC18.6■□□□□ 0.57
EFNB3Q15768 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EFNB3Q15768 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.6■□□□□ 0.57
EFNB3Q15768 TPRG1LP1-201ENST00000598702 760 ntBASIC18.6■□□□□ 0.57
EFNB3Q15768 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EFNB3Q15768 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
EFNB3Q15768 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
EFNB3Q15768 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
EFNB3Q15768 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
EFNB3Q15768 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
EFNB3Q15768 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms