Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.81■□□□□ 0.92
RAE1P78406 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAE1P78406 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAE1P78406 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAE1P78406 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAE1P78406 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAE1P78406 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAE1P78406 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.8■□□□□ 0.92
RAE1P78406 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.8■□□□□ 0.92
RAE1P78406 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.8■□□□□ 0.92
RAE1P78406 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAE1P78406 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAE1P78406 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RAE1P78406 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.8■□□□□ 0.92
RAE1P78406 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.8■□□□□ 0.92
RAE1P78406 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.8■□□□□ 0.92
RAE1P78406 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.8■□□□□ 0.92
RAE1P78406 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.8■□□□□ 0.92
RAE1P78406 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.8■□□□□ 0.92
RAE1P78406 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RAE1P78406 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAE1P78406 CLDN5-201ENST00000403084 2357 ntBASIC20.79■□□□□ 0.92
RAE1P78406 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RAE1P78406 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAE1P78406 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RAE1P78406 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.79■□□□□ 0.92
RAE1P78406 AC131281.2-201ENST00000520478 145 ntBASIC20.79■□□□□ 0.92
RAE1P78406 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.79■□□□□ 0.92
RAE1P78406 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAE1P78406 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.78■□□□□ 0.92
RAE1P78406 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
RAE1P78406 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAE1P78406 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAE1P78406 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RAE1P78406 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAE1P78406 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.78■□□□□ 0.92
RAE1P78406 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAE1P78406 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.78■□□□□ 0.92
RAE1P78406 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAE1P78406 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.78■□□□□ 0.92
RAE1P78406 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAE1P78406 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAE1P78406 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAE1P78406 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAE1P78406 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAE1P78406 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.77■□□□□ 0.92
RAE1P78406 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAE1P78406 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAE1P78406 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAE1P78406 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAE1P78406 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
RAE1P78406 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.77■□□□□ 0.91
RAE1P78406 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RAE1P78406 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAE1P78406 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAE1P78406 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
RAE1P78406 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAE1P78406 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.76■□□□□ 0.91
RAE1P78406 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RAE1P78406 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.76■□□□□ 0.91
RAE1P78406 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.76■□□□□ 0.91
RAE1P78406 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAE1P78406 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAE1P78406 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RAE1P78406 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAE1P78406 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAE1P78406 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAE1P78406 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RAE1P78406 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAE1P78406 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.75■□□□□ 0.91
RAE1P78406 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAE1P78406 SERBP1P1-201ENST00000396021 1160 ntBASIC20.75■□□□□ 0.91
RAE1P78406 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.75■□□□□ 0.91
RAE1P78406 AC092171.4-201ENST00000609130 632 ntBASIC20.75■□□□□ 0.91
RAE1P78406 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RAE1P78406 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.75■□□□□ 0.91
RAE1P78406 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.74■□□□□ 0.91
RAE1P78406 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
RAE1P78406 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAE1P78406 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAE1P78406 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.74■□□□□ 0.91
RAE1P78406 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.74■□□□□ 0.91
RAE1P78406 OR2I1P-207ENST00000453522 948 ntBASIC20.74■□□□□ 0.91
RAE1P78406 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.74■□□□□ 0.91
RAE1P78406 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RAE1P78406 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAE1P78406 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAE1P78406 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RAE1P78406 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
RAE1P78406 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.74■□□□□ 0.91
RAE1P78406 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RAE1P78406 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAE1P78406 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.74■□□□□ 0.91
RAE1P78406 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAE1P78406 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAE1P78406 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.73■□□□□ 0.91
RAE1P78406 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAE1P78406 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.73■□□□□ 0.91
RAE1P78406 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.73■□□□□ 0.91
RAE1P78406 AC010525.1-201ENST00000585559 441 ntBASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms