Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.56■□□□□ 0.88
RAB38P57729 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.56■□□□□ 0.88
RAB38P57729 AC105265.2-201ENST00000467189 838 ntBASIC20.56■□□□□ 0.88
RAB38P57729 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RAB38P57729 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RAB38P57729 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB38P57729 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB38P57729 AC127496.7-201ENST00000625110 1798 ntBASIC20.56■□□□□ 0.88
RAB38P57729 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.56■□□□□ 0.88
RAB38P57729 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB38P57729 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB38P57729 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB38P57729 OXCT2P1-201ENST00000447263 1535 ntBASIC20.55■□□□□ 0.88
RAB38P57729 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB38P57729 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB38P57729 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.55■□□□□ 0.88
RAB38P57729 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.55■□□□□ 0.88
RAB38P57729 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.55■□□□□ 0.88
RAB38P57729 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB38P57729 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB38P57729 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
RAB38P57729 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB38P57729 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB38P57729 AC012676.1-201ENST00000574705 1949 ntBASIC20.55■□□□□ 0.88
RAB38P57729 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB38P57729 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAB38P57729 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAB38P57729 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
RAB38P57729 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB38P57729 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB38P57729 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RAB38P57729 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAB38P57729 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.54■□□□□ 0.88
RAB38P57729 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.54■□□□□ 0.88
RAB38P57729 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RAB38P57729 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RAB38P57729 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB38P57729 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB38P57729 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB38P57729 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB38P57729 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB38P57729 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB38P57729 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB38P57729 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.53■□□□□ 0.88
RAB38P57729 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.53■□□□□ 0.88
RAB38P57729 AC079089.2-201ENST00000531211 1277 ntBASIC20.53■□□□□ 0.88
RAB38P57729 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB38P57729 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAB38P57729 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.53■□□□□ 0.88
RAB38P57729 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB38P57729 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB38P57729 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAB38P57729 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB38P57729 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
RAB38P57729 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB38P57729 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.53■□□□□ 0.88
RAB38P57729 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
RAB38P57729 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RAB38P57729 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAB38P57729 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RAB38P57729 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAB38P57729 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAB38P57729 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAB38P57729 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.52■□□□□ 0.88
RAB38P57729 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
RAB38P57729 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.52■□□□□ 0.88
RAB38P57729 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAB38P57729 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
RAB38P57729 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RAB38P57729 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RAB38P57729 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RAB38P57729 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAB38P57729 AC137767.1-201ENST00000602918 1920 ntBASIC20.51■□□□□ 0.87
RAB38P57729 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
RAB38P57729 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.51■□□□□ 0.87
RAB38P57729 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.51■□□□□ 0.87
RAB38P57729 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RAB38P57729 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.51■□□□□ 0.87
RAB38P57729 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RAB38P57729 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAB38P57729 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.5■□□□□ 0.87
RAB38P57729 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.5■□□□□ 0.87
RAB38P57729 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB38P57729 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RAB38P57729 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.5■□□□□ 0.87
RAB38P57729 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RAB38P57729 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB38P57729 MIR572-201ENST00000384983 95 ntBASIC20.5■□□□□ 0.87
RAB38P57729 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.5■□□□□ 0.87
RAB38P57729 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.5■□□□□ 0.87
RAB38P57729 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
RAB38P57729 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB38P57729 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RAB38P57729 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB38P57729 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB38P57729 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB38P57729 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.5■□□□□ 0.87
RAB38P57729 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB38P57729 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RAB38P57729 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms