Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC26.78■■□□□ 1.88
PDE1AP54750 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
PDE1AP54750 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
PDE1AP54750 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC26.78■■□□□ 1.88
PDE1AP54750 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC26.78■■□□□ 1.88
PDE1AP54750 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
PDE1AP54750 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
PDE1AP54750 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
PDE1AP54750 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
PDE1AP54750 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
PDE1AP54750 EI24-211ENST00000534546 1544 ntTSL 2 BASIC26.78■■□□□ 1.88
PDE1AP54750 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC26.78■■□□□ 1.88
PDE1AP54750 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
PDE1AP54750 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC26.78■■□□□ 1.88
PDE1AP54750 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
PDE1AP54750 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PDE1AP54750 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PDE1AP54750 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
PDE1AP54750 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
PDE1AP54750 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC26.77■■□□□ 1.88
PDE1AP54750 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
PDE1AP54750 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC26.77■■□□□ 1.88
PDE1AP54750 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PDE1AP54750 USP45-205ENST00000472914 1617 ntTSL 5 BASIC26.76■■□□□ 1.87
PDE1AP54750 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
PDE1AP54750 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
PDE1AP54750 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
PDE1AP54750 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
PDE1AP54750 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC26.76■■□□□ 1.87
PDE1AP54750 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PDE1AP54750 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
PDE1AP54750 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
PDE1AP54750 AC092053.2-201ENST00000640557 1818 ntBASIC26.76■■□□□ 1.87
PDE1AP54750 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC26.76■■□□□ 1.87
PDE1AP54750 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PDE1AP54750 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC26.75■■□□□ 1.87
PDE1AP54750 AC008406.3-201ENST00000620001 1374 ntBASIC26.75■■□□□ 1.87
PDE1AP54750 UNC93B3-201ENST00000308076 687 ntBASIC26.75■■□□□ 1.87
PDE1AP54750 PEMT-206ENST00000435340 960 ntTSL 5 BASIC26.75■■□□□ 1.87
PDE1AP54750 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC26.75■■□□□ 1.87
PDE1AP54750 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC26.75■■□□□ 1.87
PDE1AP54750 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
PDE1AP54750 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC26.75■■□□□ 1.87
PDE1AP54750 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PDE1AP54750 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC26.75■■□□□ 1.87
PDE1AP54750 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC26.74■■□□□ 1.87
PDE1AP54750 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC26.74■■□□□ 1.87
PDE1AP54750 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PDE1AP54750 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC26.74■■□□□ 1.87
PDE1AP54750 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC26.74■■□□□ 1.87
PDE1AP54750 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
PDE1AP54750 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC26.73■■□□□ 1.87
PDE1AP54750 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
PDE1AP54750 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
PDE1AP54750 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
PDE1AP54750 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC26.73■■□□□ 1.87
PDE1AP54750 PTMA-205ENST00000410064 814 ntTSL 2 BASIC26.73■■□□□ 1.87
PDE1AP54750 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
PDE1AP54750 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC26.73■■□□□ 1.87
PDE1AP54750 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
PDE1AP54750 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PDE1AP54750 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC26.73■■□□□ 1.87
PDE1AP54750 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PDE1AP54750 LINC00565-201ENST00000562710 2331 ntBASIC26.73■■□□□ 1.87
PDE1AP54750 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC26.73■■□□□ 1.87
PDE1AP54750 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC26.73■■□□□ 1.87
PDE1AP54750 MYB-221ENST00000527615 2381 ntTSL 5 BASIC26.72■■□□□ 1.87
PDE1AP54750 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PDE1AP54750 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
PDE1AP54750 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
PDE1AP54750 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PDE1AP54750 SNX3-202ENST00000349379 890 ntTSL 2 BASIC26.72■■□□□ 1.87
PDE1AP54750 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC26.72■■□□□ 1.87
PDE1AP54750 SLC47A1P1-202ENST00000449666 945 ntBASIC26.72■■□□□ 1.87
PDE1AP54750 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PDE1AP54750 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PDE1AP54750 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
PDE1AP54750 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PDE1AP54750 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PDE1AP54750 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
PDE1AP54750 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC26.71■■□□□ 1.87
PDE1AP54750 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
PDE1AP54750 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC26.71■■□□□ 1.87
PDE1AP54750 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PDE1AP54750 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
PDE1AP54750 RBM38-205ENST00000440234 686 ntTSL 2 BASIC26.71■■□□□ 1.87
PDE1AP54750 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
PDE1AP54750 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PDE1AP54750 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PDE1AP54750 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC26.71■■□□□ 1.87
PDE1AP54750 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PDE1AP54750 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC26.7■■□□□ 1.87
PDE1AP54750 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC26.7■■□□□ 1.87
PDE1AP54750 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
PDE1AP54750 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC26.7■■□□□ 1.86
PDE1AP54750 AC024257.2-201ENST00000549699 147 ntBASIC26.7■■□□□ 1.86
PDE1AP54750 MIR4767-201ENST00000582827 78 ntBASIC26.7■■□□□ 1.86
PDE1AP54750 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC26.7■■□□□ 1.86
PDE1AP54750 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
PDE1AP54750 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms