Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.86■□□□□ 0.61
ATP1B3P54709 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP1B3P54709 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
ATP1B3P54709 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP1B3P54709 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP1B3P54709 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ATP1B3P54709 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP1B3P54709 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.86■□□□□ 0.61
ATP1B3P54709 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ATP1B3P54709 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP1B3P54709 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP1B3P54709 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ATP1B3P54709 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.85■□□□□ 0.61
ATP1B3P54709 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ATP1B3P54709 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
ATP1B3P54709 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ATP1B3P54709 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.85■□□□□ 0.61
ATP1B3P54709 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP1B3P54709 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ATP1B3P54709 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP1B3P54709 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP1B3P54709 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ATP1B3P54709 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP1B3P54709 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
ATP1B3P54709 AC087742.1-201ENST00000575880 1738 ntBASIC18.85■□□□□ 0.61
ATP1B3P54709 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ATP1B3P54709 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.85■□□□□ 0.61
ATP1B3P54709 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP1B3P54709 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP1B3P54709 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP1B3P54709 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
ATP1B3P54709 AC092053.2-201ENST00000640557 1818 ntBASIC18.84■□□□□ 0.61
ATP1B3P54709 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP1B3P54709 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATP1B3P54709 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.84■□□□□ 0.61
ATP1B3P54709 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.84■□□□□ 0.61
ATP1B3P54709 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP1B3P54709 MIR6724-1-201ENST00000616420 92 ntBASIC18.84■□□□□ 0.61
ATP1B3P54709 MIR6724-2-201ENST00000616483 92 ntBASIC18.84■□□□□ 0.61
ATP1B3P54709 MIR6724-4-201ENST00000617390 92 ntBASIC18.84■□□□□ 0.61
ATP1B3P54709 MIR6724-3-201ENST00000622482 92 ntBASIC18.84■□□□□ 0.61
ATP1B3P54709 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP1B3P54709 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP1B3P54709 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.84■□□□□ 0.61
ATP1B3P54709 C17orf82-201ENST00000623772 1530 ntBASIC18.84■□□□□ 0.61
ATP1B3P54709 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATP1B3P54709 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATP1B3P54709 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATP1B3P54709 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
ATP1B3P54709 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.83■□□□□ 0.61
ATP1B3P54709 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ATP1B3P54709 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
ATP1B3P54709 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ATP1B3P54709 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
ATP1B3P54709 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ATP1B3P54709 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATP1B3P54709 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATP1B3P54709 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ATP1B3P54709 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP1B3P54709 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ATP1B3P54709 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP1B3P54709 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP1B3P54709 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
ATP1B3P54709 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP1B3P54709 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP1B3P54709 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.82■□□□□ 0.6
ATP1B3P54709 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP1B3P54709 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP1B3P54709 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.82■□□□□ 0.6
ATP1B3P54709 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
ATP1B3P54709 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATP1B3P54709 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ATP1B3P54709 LINC01960-201ENST00000563759 1884 ntBASIC18.82■□□□□ 0.6
ATP1B3P54709 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.82■□□□□ 0.6
ATP1B3P54709 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP1B3P54709 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP1B3P54709 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ATP1B3P54709 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP1B3P54709 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ATP1B3P54709 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ATP1B3P54709 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.81■□□□□ 0.6
ATP1B3P54709 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP1B3P54709 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.81■□□□□ 0.6
ATP1B3P54709 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP1B3P54709 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP1B3P54709 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.81■□□□□ 0.6
ATP1B3P54709 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.81■□□□□ 0.6
ATP1B3P54709 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP1B3P54709 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP1B3P54709 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.81■□□□□ 0.6
ATP1B3P54709 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.81■□□□□ 0.6
ATP1B3P54709 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
ATP1B3P54709 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
ATP1B3P54709 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.8■□□□□ 0.6
ATP1B3P54709 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ATP1B3P54709 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP1B3P54709 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP1B3P54709 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP1B3P54709 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP1B3P54709 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms