Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 YOR338WYOR338W 1092 nt2.62□□□□□ -1.99
VPS55P47111 MRPL51YPR100W 423 nt2.62□□□□□ -1.99
VPS55P47111 YBR103C-AYBR103C-A 144 nt2.62□□□□□ -1.99
VPS55P47111 RNA14YMR061W 2034 nt2.62□□□□□ -1.99
VPS55P47111 MEK1YOR351C 1494 nt2.62□□□□□ -1.99
VPS55P47111 KDX1YKL161C 1302 nt2.62□□□□□ -1.99
VPS55P47111 AUS1YOR011W 4185 nt2.62□□□□□ -1.99
VPS55P47111 PUB1YNL016W 1362 nt2.61□□□□□ -1.99
VPS55P47111 EXO5YBR163W 1758 nt2.61□□□□□ -1.99
VPS55P47111 YEL025CYEL025C 3567 nt2.61□□□□□ -1.99
VPS55P47111 OPI6YDL096C 327 nt2.61□□□□□ -1.99
VPS55P47111 TPM1YNL079C 600 nt2.61□□□□□ -1.99
VPS55P47111 YNL320WYNL320W 855 nt2.61□□□□□ -1.99
VPS55P47111 SUI3YPL237W 858 nt2.61□□□□□ -1.99
VPS55P47111 ECM2YBR065C 1095 nt2.61□□□□□ -1.99
VPS55P47111 YBR196C-BYBR196C-B 105 nt2.61□□□□□ -1.99
VPS55P47111 BUD5YCR038C 1929 nt2.61□□□□□ -1.99
VPS55P47111 PCL10YGL134W 1302 nt2.61□□□□□ -1.99
VPS55P47111 YHR080CYHR080C 4038 nt2.61□□□□□ -1.99
VPS55P47111 YPR022CYPR022C 3402 nt2.61□□□□□ -1.99
VPS55P47111 MRE11YMR224C 2079 nt2.61□□□□□ -1.99
VPS55P47111 SSE2YBR169C 2082 nt2.61□□□□□ -1.99
VPS55P47111 YSP2YDR326C 4317 nt2.6□□□□□ -1.99
VPS55P47111 YDL109CYDL109C 1944 nt2.6□□□□□ -1.99
VPS55P47111 STE6YKL209C 3873 nt2.6□□□□□ -1.99
VPS55P47111 PEP7YDR323C 1548 nt2.6□□□□□ -1.99
VPS55P47111 ENT3YJR125C 1227 nt2.6□□□□□ -1.99
VPS55P47111 YOR292CYOR292C 930 nt2.6□□□□□ -1.99
VPS55P47111 snR37snR37 386 nt2.6□□□□□ -1.99
VPS55P47111 SSM4YIL030C 3960 nt2.6□□□□□ -1.99
VPS55P47111 ZDS2YML109W 2829 nt2.59□□□□□ -1.99
VPS55P47111 PHO13YDL236W 939 nt2.59□□□□□ -1.99
VPS55P47111 AGE2YIL044C 897 nt2.59□□□□□ -1.99
VPS55P47111 MAD2YJL030W 591 nt2.59□□□□□ -1.99
VPS55P47111 RPS1BYML063W 768 nt2.59□□□□□ -1.99
VPS55P47111 GTR1YML121W 933 nt2.59□□□□□ -1.99
VPS55P47111 TOM40YMR203W 1164 nt2.59□□□□□ -1.99
VPS55P47111 INN1YNL152W 1230 nt2.59□□□□□ -1.99
VPS55P47111 YOL019W-AYOL019W-A 153 nt2.59□□□□□ -1.99
VPS55P47111 YOR073W-AYOR073W-A 234 nt2.59□□□□□ -1.99
VPS55P47111 RPN1YHR027C 2982 nt2.59□□□□□ -2
VPS55P47111 KTR6YPL053C 1341 nt2.59□□□□□ -2
VPS55P47111 PKH1YDR490C 2301 nt2.59□□□□□ -2
VPS55P47111 LCB5YLR260W 2064 nt2.59□□□□□ -2
VPS55P47111 THR4YCR053W 1545 nt2.58□□□□□ -2
VPS55P47111 MIT1YEL007W 2001 nt2.58□□□□□ -2
VPS55P47111 REC8YPR007C 2043 nt2.58□□□□□ -2
VPS55P47111 RCY1YJL204C 2523 nt2.58□□□□□ -2
VPS55P47111 YAL004WYAL004W 648 nt2.58□□□□□ -2
VPS55P47111 MRT4YKL009W 711 nt2.58□□□□□ -2
VPS55P47111 NSE1YLR007W 1011 nt2.58□□□□□ -2
VPS55P47111 PAM18YLR008C 507 nt2.58□□□□□ -2
VPS55P47111 YPL088WYPL088W 1029 nt2.58□□□□□ -2
VPS55P47111 ARG5,6YER069W 2592 nt2.58□□□□□ -2
VPS55P47111 STU2YLR045C 2667 nt2.58□□□□□ -2
VPS55P47111 RPN2YIL075C 2838 nt2.58□□□□□ -2
VPS55P47111 TIP20YGL145W 2106 nt2.57□□□□□ -2
VPS55P47111 FAR1YJL157C 2493 nt2.57□□□□□ -2
VPS55P47111 HMLALPHA1YCL066W 528 nt2.57□□□□□ -2
VPS55P47111 MATALPHA1YCR040W 528 nt2.57□□□□□ -2
VPS55P47111 YGL082WYGL082W 1146 nt2.57□□□□□ -2
VPS55P47111 RAI1YGL246C 1164 nt2.57□□□□□ -2
VPS55P47111 REE1YJL217W 597 nt2.57□□□□□ -2
VPS55P47111 ILV5YLR355C 1188 nt2.57□□□□□ -2
VPS55P47111 YNL013CYNL013C 378 nt2.57□□□□□ -2
VPS55P47111 RHO5YNL180C 996 nt2.57□□□□□ -2
VPS55P47111 GIS2YNL255C 462 nt2.57□□□□□ -2
VPS55P47111 FRE4YNR060W 2160 nt2.57□□□□□ -2
VPS55P47111 PTR3YFR029W 2037 nt2.56□□□□□ -2
VPS55P47111 YDR444WYDR444W 2064 nt2.56□□□□□ -2
VPS55P47111 SRS2YJL092W 3525 nt2.56□□□□□ -2
VPS55P47111 PUG1YER185W 912 nt2.56□□□□□ -2
VPS55P47111 LNP1YHR192W 837 nt2.56□□□□□ -2
VPS55P47111 YIL163CYIL163C 354 nt2.56□□□□□ -2
VPS55P47111 RPL19BYBL027W 570 nt2.56□□□□□ -2
VPS55P47111 TVP18YMR071C 504 nt2.56□□□□□ -2
VPS55P47111 GOT1YMR292W 417 nt2.56□□□□□ -2
VPS55P47111 NIP7YPL211W 546 nt2.56□□□□□ -2
VPS55P47111 HAL1YPR005C 885 nt2.56□□□□□ -2
VPS55P47111 UGA3YDL170W 1587 nt2.56□□□□□ -2
VPS55P47111 YDL180WYDL180W 1644 nt2.56□□□□□ -2
VPS55P47111 RPA190YOR341W 4995 nt2.56□□□□□ -2
VPS55P47111 YMR317WYMR317W 3423 nt2.56□□□□□ -2
VPS55P47111 DNM1YLL001W 2274 nt2.56□□□□□ -2
VPS55P47111 ERB1YMR049C 2424 nt2.56□□□□□ -2
VPS55P47111 TMN2YDR107C 2019 nt2.55□□□□□ -2
VPS55P47111 YGL041W-AYGL041W-A 465 nt2.55□□□□□ -2
VPS55P47111 MRM2YGL136C 963 nt2.55□□□□□ -2
VPS55P47111 SUC2YIL162W 1599 nt2.55□□□□□ -2
VPS55P47111 YLR428CYLR428C 345 nt2.55□□□□□ -2
VPS55P47111 ATG23YLR431C 1362 nt2.55□□□□□ -2
VPS55P47111 APL4YPR029C 2499 nt2.55□□□□□ -2
VPS55P47111 NAM2YLR382C 2685 nt2.55□□□□□ -2
VPS55P47111 HOS2YGL194C 1359 nt2.54□□□□□ -2
VPS55P47111 DIN7YDR263C 1293 nt2.54□□□□□ -2
VPS55P47111 COX23YHR116W 456 nt2.54□□□□□ -2
VPS55P47111 ERG20YJL167W 1059 nt2.54□□□□□ -2
VPS55P47111 RPS21AYKR057W 264 nt2.54□□□□□ -2
VPS55P47111 IDH2YOR136W 1110 nt2.54□□□□□ -2
VPS55P47111 CDC9YDL164C 2268 nt2.54□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 22.7 ms