Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 DCS1YLR270W 1053 nt4.45□□□□□ -1.7
TY1B-JR1P47098 ARP4YJL081C 1470 nt4.45□□□□□ -1.7
TY1B-JR1P47098 TFB2YPL122C 1542 nt4.44□□□□□ -1.7
TY1B-JR1P47098 AIM25YJR100C 984 nt4.44□□□□□ -1.7
TY1B-JR1P47098 FRE7YOL152W 1863 nt4.44□□□□□ -1.7
TY1B-JR1P47098 PSK2YOL045W 3306 nt4.43□□□□□ -1.7
TY1B-JR1P47098 TRM44YPL030W 1704 nt4.43□□□□□ -1.7
TY1B-JR1P47098 DCV1YFR012W 609 nt4.43□□□□□ -1.7
TY1B-JR1P47098 IDP2YLR174W 1239 nt4.43□□□□□ -1.7
TY1B-JR1P47098 YFL040WYFL040W 1623 nt4.43□□□□□ -1.7
TY1B-JR1P47098 CIT1YNR001C 1440 nt4.43□□□□□ -1.7
TY1B-JR1P47098 SHH3YMR118C 591 nt4.42□□□□□ -1.7
TY1B-JR1P47098 ADD37YMR184W 597 nt4.42□□□□□ -1.7
TY1B-JR1P47098 ATG3YNR007C 933 nt4.42□□□□□ -1.7
TY1B-JR1P47098 ARO10YDR380W 1908 nt4.42□□□□□ -1.7
TY1B-JR1P47098 ESL2YKR096W 3588 nt4.42□□□□□ -1.7
TY1B-JR1P47098 YDR186CYDR186C 2634 nt4.42□□□□□ -1.7
TY1B-JR1P47098 SAC1YKL212W 1872 nt4.42□□□□□ -1.7
TY1B-JR1P47098 TOM40YMR203W 1164 nt4.42□□□□□ -1.7
TY1B-JR1P47098 AYT1YLL063C 1425 nt4.42□□□□□ -1.7
TY1B-JR1P47098 ATP5YDR298C 639 nt4.41□□□□□ -1.7
TY1B-JR1P47098 SME1YOR159C 285 nt4.41□□□□□ -1.7
TY1B-JR1P47098 CHS2YBR038W 2892 nt4.41□□□□□ -1.7
TY1B-JR1P47098 KTR7YIL085C 1554 nt4.41□□□□□ -1.7
TY1B-JR1P47098 ENA5YDR038C 3276 nt4.4□□□□□ -1.7
TY1B-JR1P47098 PEF1YGR058W 1008 nt4.4□□□□□ -1.7
TY1B-JR1P47098 COX17YLL009C 210 nt4.4□□□□□ -1.7
TY1B-JR1P47098 SPO16YHR153C 597 nt4.4□□□□□ -1.71
TY1B-JR1P47098 YGR079WYGR079W 1113 nt4.39□□□□□ -1.71
TY1B-JR1P47098 YMR315WYMR315W 1050 nt4.39□□□□□ -1.71
TY1B-JR1P47098 TSC11YER093C 4293 nt4.39□□□□□ -1.71
TY1B-JR1P47098 HEF3YNL014W 3135 nt4.38□□□□□ -1.71
TY1B-JR1P47098 snR70snR70 164 nt4.38□□□□□ -1.71
TY1B-JR1P47098 YPR050CYPR050C 414 nt4.38□□□□□ -1.71
TY1B-JR1P47098 SEC9YGR009C 1956 nt4.38□□□□□ -1.71
TY1B-JR1P47098 YMR294W-AYMR294W-A 360 nt4.37□□□□□ -1.71
TY1B-JR1P47098 CUZ1YNL155W 825 nt4.37□□□□□ -1.71
TY1B-JR1P47098 YPL168WYPL168W 1293 nt4.37□□□□□ -1.71
TY1B-JR1P47098 CIT3YPR001W 1461 nt4.37□□□□□ -1.71
TY1B-JR1P47098 ICY1YMR195W 384 nt4.37□□□□□ -1.71
TY1B-JR1P47098 TRS85YDR108W 2097 nt4.36□□□□□ -1.71
TY1B-JR1P47098 CIN8YEL061C 3003 nt4.36□□□□□ -1.71
TY1B-JR1P47098 RAX2YLR084C 3663 nt4.36□□□□□ -1.71
TY1B-JR1P47098 SLD2YKL108W 1362 nt4.36□□□□□ -1.71
TY1B-JR1P47098 YKR070WYKR070W 1059 nt4.35□□□□□ -1.71
TY1B-JR1P47098 YBR298C-AYBR298C-A 222 nt4.35□□□□□ -1.71
TY1B-JR1P47098 KRS1YDR037W 1776 nt4.34□□□□□ -1.71
TY1B-JR1P47098 RPA135YPR010C 3612 nt4.34□□□□□ -1.71
TY1B-JR1P47098 YLR278CYLR278C 4026 nt4.34□□□□□ -1.71
TY1B-JR1P47098 BUD5YCR038C 1929 nt4.34□□□□□ -1.71
TY1B-JR1P47098 SPP41YDR464W 4308 nt4.34□□□□□ -1.71
TY1B-JR1P47098 PSF1YDR013W 627 nt4.34□□□□□ -1.71
TY1B-JR1P47098 CAJ1YER048C 1176 nt4.34□□□□□ -1.71
TY1B-JR1P47098 FYV5YCL058C 459 nt4.34□□□□□ -1.71
TY1B-JR1P47098 PRP22YER013W 3438 nt4.34□□□□□ -1.72
TY1B-JR1P47098 VPS17YOR132W 1656 nt4.34□□□□□ -1.72
TY1B-JR1P47098 YPR003CYPR003C 2265 nt4.34□□□□□ -1.72
TY1B-JR1P47098 PTP3YER075C 2787 nt4.33□□□□□ -1.72
TY1B-JR1P47098 NTH1YDR001C 2256 nt4.33□□□□□ -1.72
TY1B-JR1P47098 ATG27YJL178C 816 nt4.33□□□□□ -1.72
TY1B-JR1P47098 OM14YBR230C 405 nt4.33□□□□□ -1.72
TY1B-JR1P47098 UBP1YDL122W 2430 nt4.32□□□□□ -1.72
TY1B-JR1P47098 YGR122WYGR122W 1209 nt4.32□□□□□ -1.72
TY1B-JR1P47098 YHL005CYHL005C 393 nt4.32□□□□□ -1.72
TY1B-JR1P47098 SAW1YAL027W 786 nt4.32□□□□□ -1.72
TY1B-JR1P47098 GPI1YGR216C 1830 nt4.32□□□□□ -1.72
TY1B-JR1P47098 DBP3YGL078C 1572 nt4.32□□□□□ -1.72
TY1B-JR1P47098 PEX1YKL197C 3132 nt4.32□□□□□ -1.72
TY1B-JR1P47098 FAP7YDL166C 594 nt4.32□□□□□ -1.72
TY1B-JR1P47098 RPL23AYBL087C 414 nt4.32□□□□□ -1.72
TY1B-JR1P47098 SSA2YLL024C 1920 nt4.32□□□□□ -1.72
TY1B-JR1P47098 PRR2YDL214C 2100 nt4.31□□□□□ -1.72
TY1B-JR1P47098 MIT1YEL007W 2001 nt4.31□□□□□ -1.72
TY1B-JR1P47098 YFL051CYFL051C 483 nt4.3□□□□□ -1.72
TY1B-JR1P47098 TDA5YLR426W 981 nt4.3□□□□□ -1.72
TY1B-JR1P47098 KTI11YBL071W-A 249 nt4.3□□□□□ -1.72
TY1B-JR1P47098 YOL019WYOL019W 1656 nt4.3□□□□□ -1.72
TY1B-JR1P47098 RPP1AYDL081C 321 nt4.3□□□□□ -1.72
TY1B-JR1P47098 CLB3YDL155W 1284 nt4.3□□□□□ -1.72
TY1B-JR1P47098 RAD1YPL022W 3303 nt4.29□□□□□ -1.72
TY1B-JR1P47098 SNF3YDL194W 2655 nt4.29□□□□□ -1.72
TY1B-JR1P47098 UBC1YDR177W 648 nt4.29□□□□□ -1.72
TY1B-JR1P47098 JIP3YLR331C 378 nt4.29□□□□□ -1.72
TY1B-JR1P47098 ATG18YFR021W 1503 nt4.29□□□□□ -1.72
TY1B-JR1P47098 JJJ1YNL227C 1773 nt4.29□□□□□ -1.72
TY1B-JR1P47098 CDC16YKL022C 2523 nt4.29□□□□□ -1.72
TY1B-JR1P47098 HOS1YPR068C 1413 nt4.29□□□□□ -1.72
TY1B-JR1P47098 YHR078WYHR078W 1659 nt4.29□□□□□ -1.72
TY1B-JR1P47098 SMF1YOL122C 1728 nt4.28□□□□□ -1.72
TY1B-JR1P47098 MSN2YMR037C 2115 nt4.28□□□□□ -1.72
TY1B-JR1P47098 NEW1YPL226W 3591 nt4.28□□□□□ -1.72
TY1B-JR1P47098 RPS13YDR064W 456 nt4.28□□□□□ -1.72
TY1B-JR1P47098 YDR537CYDR537C 606 nt4.28□□□□□ -1.72
TY1B-JR1P47098 TOS8YGL096W 831 nt4.28□□□□□ -1.72
TY1B-JR1P47098 YMR085WYMR085W 1299 nt4.28□□□□□ -1.72
TY1B-JR1P47098 MNN1YER001W 2289 nt4.28□□□□□ -1.72
TY1B-JR1P47098 GCR2YNL199C 1605 nt4.28□□□□□ -1.72
TY1B-JR1P47098 MSE1YOL033W 1611 nt4.28□□□□□ -1.72
TY1B-JR1P47098 EMC1YCL045C 2283 nt4.28□□□□□ -1.73
TY1B-JR1P47098 MGM101YJR144W 810 nt4.27□□□□□ -1.73
Retrieved 100 of 7,029 protein–RNA pairs in 24.3 ms