Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 AC069152.1-201ENST00000438030 544 ntBASIC21.86■■□□□ 1.09
HOXA6P31267 AL138781.1-201ENST00000566567 1274 ntBASIC21.86■■□□□ 1.09
HOXA6P31267 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.86■■□□□ 1.09
HOXA6P31267 AC133041.1-202ENST00000642053 222 ntBASIC21.86■■□□□ 1.09
HOXA6P31267 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HOXA6P31267 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.86■■□□□ 1.09
HOXA6P31267 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HOXA6P31267 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HOXA6P31267 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.85■■□□□ 1.09
HOXA6P31267 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
HOXA6P31267 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
HOXA6P31267 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.85■■□□□ 1.09
HOXA6P31267 AC133552.2-202ENST00000575694 574 ntBASIC21.85■■□□□ 1.09
HOXA6P31267 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.85■■□□□ 1.09
HOXA6P31267 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.85■■□□□ 1.09
HOXA6P31267 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.85■■□□□ 1.09
HOXA6P31267 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.85■■□□□ 1.09
HOXA6P31267 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HOXA6P31267 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HOXA6P31267 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
HOXA6P31267 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HOXA6P31267 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.84■■□□□ 1.09
HOXA6P31267 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HOXA6P31267 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.84■■□□□ 1.09
HOXA6P31267 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HOXA6P31267 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HOXA6P31267 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
HOXA6P31267 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
HOXA6P31267 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HOXA6P31267 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.83■■□□□ 1.09
HOXA6P31267 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
HOXA6P31267 FAM201B-201ENST00000458407 597 ntBASIC21.83■■□□□ 1.09
HOXA6P31267 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
HOXA6P31267 UBE2DNL-204ENST00000602536 740 ntBASIC21.83■■□□□ 1.09
HOXA6P31267 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
HOXA6P31267 MYCNOS-205ENST00000641950 531 ntBASIC21.83■■□□□ 1.09
HOXA6P31267 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.83■■□□□ 1.09
HOXA6P31267 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.83■■□□□ 1.08
HOXA6P31267 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HOXA6P31267 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
HOXA6P31267 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
HOXA6P31267 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.82■■□□□ 1.08
HOXA6P31267 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
HOXA6P31267 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.82■■□□□ 1.08
HOXA6P31267 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.82■■□□□ 1.08
HOXA6P31267 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.82■■□□□ 1.08
HOXA6P31267 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
HOXA6P31267 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
HOXA6P31267 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.81■■□□□ 1.08
HOXA6P31267 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HOXA6P31267 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HOXA6P31267 AC079630.1-202ENST00000618127 1840 ntBASIC21.8■■□□□ 1.08
HOXA6P31267 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HOXA6P31267 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
HOXA6P31267 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HOXA6P31267 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HOXA6P31267 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.8■■□□□ 1.08
HOXA6P31267 AF201337.1-201ENST00000520239 748 ntBASIC21.8■■□□□ 1.08
HOXA6P31267 MIR4651-201ENST00000582622 73 ntBASIC21.8■■□□□ 1.08
HOXA6P31267 AP001160.3-201ENST00000601484 763 ntBASIC21.8■■□□□ 1.08
HOXA6P31267 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HOXA6P31267 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HOXA6P31267 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HOXA6P31267 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.79■■□□□ 1.08
HOXA6P31267 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HOXA6P31267 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
HOXA6P31267 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
HOXA6P31267 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.79■■□□□ 1.08
HOXA6P31267 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.79■■□□□ 1.08
HOXA6P31267 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.79■■□□□ 1.08
HOXA6P31267 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
HOXA6P31267 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
HOXA6P31267 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
HOXA6P31267 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HOXA6P31267 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HOXA6P31267 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.78■■□□□ 1.08
HOXA6P31267 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HOXA6P31267 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.78■■□□□ 1.08
HOXA6P31267 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
HOXA6P31267 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HOXA6P31267 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
HOXA6P31267 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.77■■□□□ 1.08
HOXA6P31267 CNN2P6-201ENST00000439038 900 ntBASIC21.77■■□□□ 1.08
HOXA6P31267 KRT18P20-201ENST00000548986 1279 ntBASIC21.77■■□□□ 1.08
HOXA6P31267 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.77■■□□□ 1.08
HOXA6P31267 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.77■■□□□ 1.08
HOXA6P31267 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
HOXA6P31267 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HOXA6P31267 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
HOXA6P31267 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.76■■□□□ 1.07
HOXA6P31267 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HOXA6P31267 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
HOXA6P31267 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
HOXA6P31267 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.76■■□□□ 1.07
HOXA6P31267 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
HOXA6P31267 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.76■■□□□ 1.07
HOXA6P31267 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
HOXA6P31267 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
HOXA6P31267 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HOXA6P31267 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms