Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC26.67■■□□□ 1.86
COL4A5P29400 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC26.67■■□□□ 1.86
COL4A5P29400 AC005181.1-201ENST00000604782 1256 ntBASIC26.67■■□□□ 1.86
COL4A5P29400 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
COL4A5P29400 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC26.66■■□□□ 1.86
COL4A5P29400 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL4A5P29400 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC26.66■■□□□ 1.86
COL4A5P29400 CNN2P6-201ENST00000439038 900 ntBASIC26.66■■□□□ 1.86
COL4A5P29400 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC26.66■■□□□ 1.86
COL4A5P29400 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC26.66■■□□□ 1.86
COL4A5P29400 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL4A5P29400 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC26.66■■□□□ 1.86
COL4A5P29400 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
COL4A5P29400 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC26.66■■□□□ 1.86
COL4A5P29400 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC26.66■■□□□ 1.86
COL4A5P29400 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC26.66■■□□□ 1.86
COL4A5P29400 AC005224.4-201ENST00000583262 1652 ntBASIC26.65■■□□□ 1.86
COL4A5P29400 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
COL4A5P29400 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
COL4A5P29400 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
COL4A5P29400 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC26.65■■□□□ 1.86
COL4A5P29400 AC231657.2-201ENST00000624556 255 ntBASIC26.65■■□□□ 1.86
COL4A5P29400 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
COL4A5P29400 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
COL4A5P29400 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC26.65■■□□□ 1.86
COL4A5P29400 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
COL4A5P29400 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC26.64■■□□□ 1.86
COL4A5P29400 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
COL4A5P29400 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
COL4A5P29400 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.64■■□□□ 1.86
COL4A5P29400 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
COL4A5P29400 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
COL4A5P29400 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
COL4A5P29400 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
COL4A5P29400 PARP1-202ENST00000366792 553 ntTSL 3 BASIC26.63■■□□□ 1.85
COL4A5P29400 UQCRFS1P1-201ENST00000435169 820 ntBASIC26.63■■□□□ 1.85
COL4A5P29400 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
COL4A5P29400 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL4A5P29400 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
COL4A5P29400 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL4A5P29400 PARP1-210ENST00000629232 477 ntTSL 5 BASIC26.63■■□□□ 1.85
COL4A5P29400 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL4A5P29400 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL4A5P29400 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
COL4A5P29400 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC26.62■■□□□ 1.85
COL4A5P29400 AC093827.2-201ENST00000512654 315 ntBASIC26.62■■□□□ 1.85
COL4A5P29400 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC26.62■■□□□ 1.85
COL4A5P29400 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
COL4A5P29400 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
COL4A5P29400 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC26.61■■□□□ 1.85
COL4A5P29400 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC26.61■■□□□ 1.85
COL4A5P29400 AC008687.6-201ENST00000596318 630 ntBASIC26.61■■□□□ 1.85
COL4A5P29400 AC087239.1-201ENST00000622671 572 ntBASIC26.61■■□□□ 1.85
COL4A5P29400 MYCNOS-205ENST00000641950 531 ntBASIC26.61■■□□□ 1.85
COL4A5P29400 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL4A5P29400 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL4A5P29400 MED17-227ENST00000640521 2047 ntTSL 5 BASIC26.6■■□□□ 1.85
COL4A5P29400 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL4A5P29400 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC26.6■■□□□ 1.85
COL4A5P29400 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
COL4A5P29400 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC26.6■■□□□ 1.85
COL4A5P29400 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC26.6■■□□□ 1.85
COL4A5P29400 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC26.6■■□□□ 1.85
COL4A5P29400 AC007322.1-201ENST00000426983 750 ntBASIC26.6■■□□□ 1.85
COL4A5P29400 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL4A5P29400 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
COL4A5P29400 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC26.59■■□□□ 1.85
COL4A5P29400 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
COL4A5P29400 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
COL4A5P29400 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC26.59■■□□□ 1.85
COL4A5P29400 DET1-205ENST00000558413 583 ntTSL 4 BASIC26.59■■□□□ 1.85
COL4A5P29400 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
COL4A5P29400 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC26.59■■□□□ 1.85
COL4A5P29400 PXK-203ENST00000383715 1756 ntTSL 5 BASIC26.58■■□□□ 1.85
COL4A5P29400 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
COL4A5P29400 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
COL4A5P29400 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC26.58■■□□□ 1.85
COL4A5P29400 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
COL4A5P29400 BRI3-207ENST00000539286 699 ntTSL 2 BASIC26.58■■□□□ 1.85
COL4A5P29400 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC26.58■■□□□ 1.85
COL4A5P29400 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
COL4A5P29400 OXCT2P1-201ENST00000447263 1535 ntBASIC26.58■■□□□ 1.84
COL4A5P29400 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC26.57■■□□□ 1.84
COL4A5P29400 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
COL4A5P29400 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
COL4A5P29400 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
COL4A5P29400 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
COL4A5P29400 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC26.57■■□□□ 1.84
COL4A5P29400 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
COL4A5P29400 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
COL4A5P29400 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC26.57■■□□□ 1.84
COL4A5P29400 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
COL4A5P29400 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
COL4A5P29400 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
COL4A5P29400 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
COL4A5P29400 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC26.56■■□□□ 1.84
COL4A5P29400 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
COL4A5P29400 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC26.56■■□□□ 1.84
COL4A5P29400 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
COL4A5P29400 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms