Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC004687.1-201ENST00000579003 1625 ntBASIC19.96■□□□□ 0.79
SHC1P29353 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHC1P29353 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.96■□□□□ 0.79
SHC1P29353 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
SHC1P29353 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SHC1P29353 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.96■□□□□ 0.79
SHC1P29353 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.96■□□□□ 0.79
SHC1P29353 MIR4767-201ENST00000582827 78 ntBASIC19.96■□□□□ 0.79
SHC1P29353 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
SHC1P29353 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHC1P29353 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHC1P29353 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SHC1P29353 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SHC1P29353 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.96■□□□□ 0.79
SHC1P29353 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHC1P29353 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHC1P29353 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHC1P29353 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SHC1P29353 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SHC1P29353 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHC1P29353 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SHC1P29353 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHC1P29353 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.95■□□□□ 0.78
SHC1P29353 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.95■□□□□ 0.78
SHC1P29353 AL138724.1-201ENST00000606771 1088 ntBASIC19.95■□□□□ 0.78
SHC1P29353 AC011298.3-201ENST00000615796 283 ntBASIC19.95■□□□□ 0.78
SHC1P29353 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.95■□□□□ 0.78
SHC1P29353 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
SHC1P29353 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.95■□□□□ 0.78
SHC1P29353 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHC1P29353 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SHC1P29353 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SHC1P29353 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHC1P29353 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SHC1P29353 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHC1P29353 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHC1P29353 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SHC1P29353 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHC1P29353 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SHC1P29353 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHC1P29353 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SHC1P29353 AC106739.1-201ENST00000617035 715 ntBASIC19.94■□□□□ 0.78
SHC1P29353 AC136469.2-201ENST00000623944 1028 ntBASIC19.94■□□□□ 0.78
SHC1P29353 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.94■□□□□ 0.78
SHC1P29353 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHC1P29353 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHC1P29353 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
SHC1P29353 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHC1P29353 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.93■□□□□ 0.78
SHC1P29353 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.93■□□□□ 0.78
SHC1P29353 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
SHC1P29353 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.93■□□□□ 0.78
SHC1P29353 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.93■□□□□ 0.78
SHC1P29353 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.93■□□□□ 0.78
SHC1P29353 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SHC1P29353 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHC1P29353 AC007375.3-201ENST00000600936 2314 ntBASIC19.93■□□□□ 0.78
SHC1P29353 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHC1P29353 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SHC1P29353 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHC1P29353 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SHC1P29353 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SHC1P29353 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.93■□□□□ 0.78
SHC1P29353 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SHC1P29353 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SHC1P29353 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SHC1P29353 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SHC1P29353 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.92■□□□□ 0.78
SHC1P29353 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHC1P29353 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.92■□□□□ 0.78
SHC1P29353 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.92■□□□□ 0.78
SHC1P29353 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SHC1P29353 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.92■□□□□ 0.78
SHC1P29353 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHC1P29353 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.92■□□□□ 0.78
SHC1P29353 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHC1P29353 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHC1P29353 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHC1P29353 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SHC1P29353 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.91■□□□□ 0.78
SHC1P29353 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.91■□□□□ 0.78
SHC1P29353 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHC1P29353 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SHC1P29353 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
SHC1P29353 AC010525.1-201ENST00000585559 441 ntBASIC19.91■□□□□ 0.78
SHC1P29353 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.91■□□□□ 0.78
SHC1P29353 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SHC1P29353 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHC1P29353 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHC1P29353 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHC1P29353 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SHC1P29353 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.91■□□□□ 0.78
SHC1P29353 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHC1P29353 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SHC1P29353 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHC1P29353 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SHC1P29353 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SHC1P29353 MIR638-201ENST00000385237 100 ntBASIC19.9■□□□□ 0.78
SHC1P29353 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.9■□□□□ 0.78
SHC1P29353 AL031432.3-201ENST00000607698 485 ntBASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms