Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN6P29350 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
PTPN6P29350 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN6P29350 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN6P29350 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN6P29350 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN6P29350 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN6P29350 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN6P29350 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN6P29350 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN6P29350 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PTPN6P29350 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.73■□□□□ 0.91
PTPN6P29350 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.73■□□□□ 0.91
PTPN6P29350 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.73■□□□□ 0.91
PTPN6P29350 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
PTPN6P29350 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
PTPN6P29350 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.73■□□□□ 0.91
PTPN6P29350 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.73■□□□□ 0.91
PTPN6P29350 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN6P29350 MIR4466-201ENST00000606121 54 ntBASIC20.72■□□□□ 0.91
PTPN6P29350 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.72■□□□□ 0.91
PTPN6P29350 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN6P29350 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN6P29350 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN6P29350 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.72■□□□□ 0.91
PTPN6P29350 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
PTPN6P29350 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PTPN6P29350 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN6P29350 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN6P29350 AL137060.1-201ENST00000618151 2648 ntBASIC20.71■□□□□ 0.91
PTPN6P29350 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PTPN6P29350 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.71■□□□□ 0.91
PTPN6P29350 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN6P29350 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.71■□□□□ 0.91
PTPN6P29350 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN6P29350 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.71■□□□□ 0.91
PTPN6P29350 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PTPN6P29350 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.71■□□□□ 0.91
PTPN6P29350 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN6P29350 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN6P29350 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.71■□□□□ 0.91
PTPN6P29350 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN6P29350 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN6P29350 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.71■□□□□ 0.91
PTPN6P29350 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.7■□□□□ 0.91
PTPN6P29350 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.7■□□□□ 0.9
PTPN6P29350 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN6P29350 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN6P29350 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN6P29350 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN6P29350 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN6P29350 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN6P29350 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PTPN6P29350 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
PTPN6P29350 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN6P29350 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN6P29350 C17orf82-201ENST00000623772 1530 ntBASIC20.69■□□□□ 0.9
PTPN6P29350 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
PTPN6P29350 AC010542.4-201ENST00000563151 1910 ntBASIC20.69■□□□□ 0.9
PTPN6P29350 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN6P29350 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN6P29350 AL136116.3-201ENST00000402907 1138 ntBASIC20.69■□□□□ 0.9
PTPN6P29350 CA15P2-201ENST00000611168 834 ntBASIC20.69■□□□□ 0.9
PTPN6P29350 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.69■□□□□ 0.9
PTPN6P29350 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN6P29350 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.69■□□□□ 0.9
PTPN6P29350 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN6P29350 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN6P29350 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN6P29350 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PTPN6P29350 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN6P29350 AC004687.1-201ENST00000579003 1625 ntBASIC20.68■□□□□ 0.9
PTPN6P29350 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN6P29350 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN6P29350 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN6P29350 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN6P29350 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.68■□□□□ 0.9
PTPN6P29350 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.68■□□□□ 0.9
PTPN6P29350 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN6P29350 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
PTPN6P29350 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.68■□□□□ 0.9
PTPN6P29350 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN6P29350 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN6P29350 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN6P29350 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN6P29350 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
PTPN6P29350 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.68■□□□□ 0.9
PTPN6P29350 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PTPN6P29350 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN6P29350 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN6P29350 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN6P29350 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN6P29350 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
PTPN6P29350 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.67■□□□□ 0.9
PTPN6P29350 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN6P29350 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.67■□□□□ 0.9
PTPN6P29350 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PTPN6P29350 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.66■□□□□ 0.9
PTPN6P29350 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTPN6P29350 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms