Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.81■□□□□ 0.76
GDF1P27539 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GDF1P27539 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.81■□□□□ 0.76
GDF1P27539 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GDF1P27539 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GDF1P27539 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GDF1P27539 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
GDF1P27539 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
GDF1P27539 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.8■□□□□ 0.76
GDF1P27539 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GDF1P27539 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GDF1P27539 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GDF1P27539 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GDF1P27539 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.8■□□□□ 0.76
GDF1P27539 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.8■□□□□ 0.76
GDF1P27539 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GDF1P27539 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
GDF1P27539 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GDF1P27539 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.8■□□□□ 0.76
GDF1P27539 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GDF1P27539 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
GDF1P27539 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.79■□□□□ 0.76
GDF1P27539 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
GDF1P27539 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GDF1P27539 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.79■□□□□ 0.76
GDF1P27539 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.79■□□□□ 0.76
GDF1P27539 OXCT2P1-201ENST00000447263 1535 ntBASIC19.79■□□□□ 0.76
GDF1P27539 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GDF1P27539 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.79■□□□□ 0.76
GDF1P27539 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
GDF1P27539 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
GDF1P27539 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.78■□□□□ 0.76
GDF1P27539 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.78■□□□□ 0.76
GDF1P27539 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.78■□□□□ 0.76
GDF1P27539 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GDF1P27539 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GDF1P27539 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GDF1P27539 AC123595.1-201ENST00000440769 1046 ntBASIC19.78■□□□□ 0.76
GDF1P27539 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.78■□□□□ 0.76
GDF1P27539 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.78■□□□□ 0.76
GDF1P27539 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.78■□□□□ 0.76
GDF1P27539 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GDF1P27539 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
GDF1P27539 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.78■□□□□ 0.76
GDF1P27539 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GDF1P27539 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
GDF1P27539 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GDF1P27539 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
GDF1P27539 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GDF1P27539 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
GDF1P27539 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.77■□□□□ 0.76
GDF1P27539 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
GDF1P27539 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GDF1P27539 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GDF1P27539 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
GDF1P27539 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.77■□□□□ 0.76
GDF1P27539 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.77■□□□□ 0.76
GDF1P27539 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.77■□□□□ 0.76
GDF1P27539 AC034268.1-201ENST00000441047 882 ntBASIC19.77■□□□□ 0.76
GDF1P27539 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.77■□□□□ 0.76
GDF1P27539 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GDF1P27539 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GDF1P27539 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.76■□□□□ 0.75
GDF1P27539 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GDF1P27539 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
GDF1P27539 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
GDF1P27539 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.76■□□□□ 0.75
GDF1P27539 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GDF1P27539 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
GDF1P27539 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GDF1P27539 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GDF1P27539 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.75■□□□□ 0.75
GDF1P27539 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
GDF1P27539 LINC02228-203ENST00000641970 1355 ntBASIC19.75■□□□□ 0.75
GDF1P27539 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
GDF1P27539 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
GDF1P27539 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GDF1P27539 AL162430.1-201ENST00000480705 870 ntBASIC19.75■□□□□ 0.75
GDF1P27539 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.75■□□□□ 0.75
GDF1P27539 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GDF1P27539 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GDF1P27539 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
GDF1P27539 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GDF1P27539 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GDF1P27539 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GDF1P27539 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.74■□□□□ 0.75
GDF1P27539 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GDF1P27539 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GDF1P27539 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
GDF1P27539 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.74■□□□□ 0.75
GDF1P27539 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.74■□□□□ 0.75
GDF1P27539 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GDF1P27539 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GDF1P27539 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.74■□□□□ 0.75
GDF1P27539 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GDF1P27539 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GDF1P27539 DUSP8P5-201ENST00000422884 1815 ntBASIC19.74■□□□□ 0.75
GDF1P27539 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.74■□□□□ 0.75
GDF1P27539 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GDF1P27539 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms