Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD40P25942 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
CD40P25942 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.86■□□□□ 0.61
CD40P25942 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CD40P25942 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CD40P25942 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD40P25942 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.86■□□□□ 0.61
CD40P25942 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD40P25942 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD40P25942 SMUG1P1-201ENST00000590640 811 ntBASIC18.86■□□□□ 0.61
CD40P25942 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.86■□□□□ 0.61
CD40P25942 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD40P25942 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD40P25942 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD40P25942 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD40P25942 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CD40P25942 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CD40P25942 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.85■□□□□ 0.61
CD40P25942 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD40P25942 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD40P25942 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.85■□□□□ 0.61
CD40P25942 KRT18P14-201ENST00000534205 1250 ntBASIC18.85■□□□□ 0.61
CD40P25942 TERF1P2-201ENST00000583350 1212 ntBASIC18.85■□□□□ 0.61
CD40P25942 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.85■□□□□ 0.61
CD40P25942 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD40P25942 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD40P25942 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.85■□□□□ 0.61
CD40P25942 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD40P25942 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD40P25942 BX005040.4-201ENST00000637145 1518 ntBASIC18.84■□□□□ 0.61
CD40P25942 LINC01960-201ENST00000563759 1884 ntBASIC18.84■□□□□ 0.61
CD40P25942 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CD40P25942 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD40P25942 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD40P25942 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
CD40P25942 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD40P25942 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.84■□□□□ 0.61
CD40P25942 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CD40P25942 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CD40P25942 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD40P25942 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.84■□□□□ 0.61
CD40P25942 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.84■□□□□ 0.61
CD40P25942 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD40P25942 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD40P25942 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CD40P25942 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CD40P25942 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.83■□□□□ 0.61
CD40P25942 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CD40P25942 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CD40P25942 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CD40P25942 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.83■□□□□ 0.61
CD40P25942 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CD40P25942 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CD40P25942 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CD40P25942 KRT18P5-201ENST00000436075 1291 ntBASIC18.83■□□□□ 0.6
CD40P25942 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.83■□□□□ 0.6
CD40P25942 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CD40P25942 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.83■□□□□ 0.6
CD40P25942 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.83■□□□□ 0.6
CD40P25942 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CD40P25942 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.83■□□□□ 0.6
CD40P25942 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.83■□□□□ 0.6
CD40P25942 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CD40P25942 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CD40P25942 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CD40P25942 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CD40P25942 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CD40P25942 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CD40P25942 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CD40P25942 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.82■□□□□ 0.6
CD40P25942 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD40P25942 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD40P25942 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.82■□□□□ 0.6
CD40P25942 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD40P25942 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD40P25942 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.82■□□□□ 0.6
CD40P25942 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CD40P25942 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CD40P25942 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CD40P25942 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.82■□□□□ 0.6
CD40P25942 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.82■□□□□ 0.6
CD40P25942 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD40P25942 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.82■□□□□ 0.6
CD40P25942 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD40P25942 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.82■□□□□ 0.6
CD40P25942 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CD40P25942 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD40P25942 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD40P25942 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
CD40P25942 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.81■□□□□ 0.6
CD40P25942 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.81■□□□□ 0.6
CD40P25942 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD40P25942 TPRG1LP1-201ENST00000598702 760 ntBASIC18.81■□□□□ 0.6
CD40P25942 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
CD40P25942 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD40P25942 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
CD40P25942 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD40P25942 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CD40P25942 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CD40P25942 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms