Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LMO1P25800 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LMO1P25800 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LMO1P25800 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.35■□□□□ 0.53
LMO1P25800 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LMO1P25800 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LMO1P25800 AC006455.2-201ENST00000429931 906 ntBASIC18.35■□□□□ 0.53
LMO1P25800 pRNA.6-201ENST00000610482 90 ntBASIC18.35■□□□□ 0.53
LMO1P25800 pRNA.5-201ENST00000612139 90 ntBASIC18.35■□□□□ 0.53
LMO1P25800 pRNA.11-201ENST00000618423 90 ntBASIC18.35■□□□□ 0.53
LMO1P25800 pRNA.13-201ENST00000619112 90 ntBASIC18.35■□□□□ 0.53
LMO1P25800 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LMO1P25800 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.35■□□□□ 0.53
LMO1P25800 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LMO1P25800 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LMO1P25800 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMO1P25800 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.34■□□□□ 0.53
LMO1P25800 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.34■□□□□ 0.53
LMO1P25800 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.34■□□□□ 0.53
LMO1P25800 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LMO1P25800 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMO1P25800 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LMO1P25800 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.34■□□□□ 0.53
LMO1P25800 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMO1P25800 AC092053.2-201ENST00000640557 1818 ntBASIC18.34■□□□□ 0.53
LMO1P25800 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.34■□□□□ 0.53
LMO1P25800 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
LMO1P25800 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
LMO1P25800 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LMO1P25800 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.33■□□□□ 0.53
LMO1P25800 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
LMO1P25800 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LMO1P25800 MIR3181-201ENST00000578512 73 ntBASIC18.33■□□□□ 0.52
LMO1P25800 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
LMO1P25800 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
LMO1P25800 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LMO1P25800 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
LMO1P25800 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
LMO1P25800 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
LMO1P25800 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.33■□□□□ 0.52
LMO1P25800 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LMO1P25800 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.33■□□□□ 0.52
LMO1P25800 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LMO1P25800 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LMO1P25800 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LMO1P25800 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LMO1P25800 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
LMO1P25800 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.32■□□□□ 0.52
LMO1P25800 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.32■□□□□ 0.52
LMO1P25800 AC131212.1-201ENST00000613771 668 ntBASIC18.32■□□□□ 0.52
LMO1P25800 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.32■□□□□ 0.52
LMO1P25800 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LMO1P25800 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LMO1P25800 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LMO1P25800 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.31■□□□□ 0.52
LMO1P25800 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.31■□□□□ 0.52
LMO1P25800 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.31■□□□□ 0.52
LMO1P25800 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LMO1P25800 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LMO1P25800 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LMO1P25800 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LMO1P25800 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.31■□□□□ 0.52
LMO1P25800 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.31■□□□□ 0.52
LMO1P25800 DUX4L19-201ENST00000557448 1267 ntBASIC18.31■□□□□ 0.52
LMO1P25800 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.31■□□□□ 0.52
LMO1P25800 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.31■□□□□ 0.52
LMO1P25800 AL031602.1-201ENST00000633169 911 ntBASIC18.31■□□□□ 0.52
LMO1P25800 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.31■□□□□ 0.52
LMO1P25800 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.31■□□□□ 0.52
LMO1P25800 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LMO1P25800 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.31■□□□□ 0.52
LMO1P25800 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LMO1P25800 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.31■□□□□ 0.52
LMO1P25800 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
LMO1P25800 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LMO1P25800 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LMO1P25800 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LMO1P25800 AL137060.1-201ENST00000618151 2648 ntBASIC18.3■□□□□ 0.52
LMO1P25800 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LMO1P25800 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LMO1P25800 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LMO1P25800 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LMO1P25800 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LMO1P25800 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.3■□□□□ 0.52
LMO1P25800 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LMO1P25800 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.3■□□□□ 0.52
LMO1P25800 MIR4466-201ENST00000606121 54 ntBASIC18.3■□□□□ 0.52
LMO1P25800 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LMO1P25800 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.3■□□□□ 0.52
LMO1P25800 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LMO1P25800 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LMO1P25800 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.3■□□□□ 0.52
LMO1P25800 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.3■□□□□ 0.52
LMO1P25800 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LMO1P25800 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LMO1P25800 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
LMO1P25800 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LMO1P25800 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.3■□□□□ 0.52
LMO1P25800 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LMO1P25800 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms