Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC38.82■■■■□ 3.8
TOP2AP11388 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC38.82■■■■□ 3.8
TOP2AP11388 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC38.81■■■■□ 3.8
TOP2AP11388 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC38.81■■■■□ 3.8
TOP2AP11388 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC38.81■■■■□ 3.8
TOP2AP11388 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC38.81■■■■□ 3.8
TOP2AP11388 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC38.81■■■■□ 3.8
TOP2AP11388 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC38.81■■■■□ 3.8
TOP2AP11388 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC38.8■■■■□ 3.8
TOP2AP11388 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC38.8■■■■□ 3.8
TOP2AP11388 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC38.8■■■■□ 3.8
TOP2AP11388 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC38.8■■■■□ 3.8
TOP2AP11388 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC38.8■■■■□ 3.8
TOP2AP11388 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC38.79■■■■□ 3.8
TOP2AP11388 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC38.79■■■■□ 3.8
TOP2AP11388 MAZ-216ENST00000616501 991 ntTSL 5 BASIC38.79■■■■□ 3.8
TOP2AP11388 AC004812.2-201ENST00000611079 2094 ntBASIC38.79■■■■□ 3.8
TOP2AP11388 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC38.79■■■■□ 3.8
TOP2AP11388 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC38.79■■■■□ 3.8
TOP2AP11388 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC38.79■■■■□ 3.8
TOP2AP11388 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC38.79■■■■□ 3.8
TOP2AP11388 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC38.79■■■■□ 3.8
TOP2AP11388 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC38.79■■■■□ 3.8
TOP2AP11388 ASL-203ENST00000380839 1765 ntTSL 5 BASIC38.78■■■■□ 3.8
TOP2AP11388 DUSP8P3-201ENST00000399571 1760 ntBASIC38.78■■■■□ 3.8
TOP2AP11388 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC38.78■■■■□ 3.8
TOP2AP11388 DUX4L16-201ENST00000555130 1264 ntBASIC38.78■■■■□ 3.8
TOP2AP11388 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC38.77■■■■□ 3.8
TOP2AP11388 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC38.77■■■■□ 3.8
TOP2AP11388 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC38.77■■■■□ 3.8
TOP2AP11388 TFG-210ENST00000620299 1289 ntTSL 5 BASIC38.77■■■■□ 3.8
TOP2AP11388 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC38.76■■■■□ 3.8
TOP2AP11388 GPX1P1-201ENST00000388829 606 ntBASIC38.76■■■■□ 3.8
TOP2AP11388 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC38.76■■■■□ 3.8
TOP2AP11388 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC38.76■■■■□ 3.8
TOP2AP11388 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC38.76■■■■□ 3.79
TOP2AP11388 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC38.76■■■■□ 3.79
TOP2AP11388 USP45-205ENST00000472914 1617 ntTSL 5 BASIC38.76■■■■□ 3.79
TOP2AP11388 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC38.75■■■■□ 3.79
TOP2AP11388 APTR-205ENST00000447009 902 ntTSL 2 BASIC38.75■■■■□ 3.79
TOP2AP11388 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC38.75■■■■□ 3.79
TOP2AP11388 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC38.74■■■■□ 3.79
TOP2AP11388 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC38.74■■■■□ 3.79
TOP2AP11388 MDK-213ENST00000617138 635 ntTSL 2 BASIC38.74■■■■□ 3.79
TOP2AP11388 AC020928.2-201ENST00000588717 2197 ntBASIC38.74■■■■□ 3.79
TOP2AP11388 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC38.74■■■■□ 3.79
TOP2AP11388 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC38.74■■■■□ 3.79
TOP2AP11388 METTL15-202ENST00000403099 795 ntTSL 5 BASIC38.73■■■■□ 3.79
TOP2AP11388 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC38.73■■■■□ 3.79
TOP2AP11388 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC38.73■■■■□ 3.79
TOP2AP11388 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC38.73■■■■□ 3.79
TOP2AP11388 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC38.73■■■■□ 3.79
TOP2AP11388 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC38.73■■■■□ 3.79
TOP2AP11388 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
TOP2AP11388 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC38.73■■■■□ 3.79
TOP2AP11388 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC38.73■■■■□ 3.79
TOP2AP11388 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC38.73■■■■□ 3.79
TOP2AP11388 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC38.72■■■■□ 3.79
TOP2AP11388 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC38.72■■■■□ 3.79
TOP2AP11388 AL139125.2-201ENST00000623134 1869 ntBASIC38.72■■■■□ 3.79
TOP2AP11388 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC38.72■■■■□ 3.79
TOP2AP11388 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC38.72■■■■□ 3.79
TOP2AP11388 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC38.72■■■■□ 3.79
TOP2AP11388 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC38.72■■■■□ 3.79
TOP2AP11388 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC38.72■■■■□ 3.79
TOP2AP11388 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC38.71■■■■□ 3.79
TOP2AP11388 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC38.71■■■■□ 3.79
TOP2AP11388 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC38.71■■■■□ 3.79
TOP2AP11388 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC38.7■■■■□ 3.79
TOP2AP11388 TSPY6P-201ENST00000448518 926 ntBASIC38.7■■■■□ 3.79
TOP2AP11388 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC38.7■■■■□ 3.79
TOP2AP11388 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC38.7■■■■□ 3.79
TOP2AP11388 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC38.7■■■■□ 3.79
TOP2AP11388 MYCNOS-205ENST00000641950 531 ntBASIC38.7■■■■□ 3.79
TOP2AP11388 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC38.7■■■■□ 3.79
TOP2AP11388 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC38.7■■■■□ 3.79
TOP2AP11388 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC38.7■■■■□ 3.79
TOP2AP11388 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC38.69■■■■□ 3.78
TOP2AP11388 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC38.69■■■■□ 3.78
TOP2AP11388 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC38.69■■■■□ 3.78
TOP2AP11388 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC38.69■■■■□ 3.78
TOP2AP11388 LINC01124-201ENST00000409786 2117 ntBASIC38.69■■■■□ 3.78
TOP2AP11388 UQCRFS1P1-201ENST00000435169 820 ntBASIC38.68■■■■□ 3.78
TOP2AP11388 AL121832.2-201ENST00000610979 668 ntBASIC38.68■■■■□ 3.78
TOP2AP11388 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC38.68■■■■□ 3.78
TOP2AP11388 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC38.68■■■■□ 3.78
TOP2AP11388 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC38.68■■■■□ 3.78
TOP2AP11388 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC38.68■■■■□ 3.78
TOP2AP11388 AC231657.2-201ENST00000624556 255 ntBASIC38.68■■■■□ 3.78
TOP2AP11388 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC38.67■■■■□ 3.78
TOP2AP11388 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC38.67■■■■□ 3.78
TOP2AP11388 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC38.67■■■■□ 3.78
TOP2AP11388 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC38.67■■■■□ 3.78
TOP2AP11388 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC38.67■■■■□ 3.78
TOP2AP11388 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC38.66■■■■□ 3.78
TOP2AP11388 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC38.66■■■■□ 3.78
TOP2AP11388 CNN2P6-201ENST00000439038 900 ntBASIC38.66■■■■□ 3.78
TOP2AP11388 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC38.66■■■■□ 3.78
TOP2AP11388 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC38.66■■■■□ 3.78
TOP2AP11388 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC38.65■■■■□ 3.78
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms