Protein–RNA interactions for Protein: P0CX68

TY1A-LR1, Transposon Ty1-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR1P0CX68 KTR2YKR061W 1278 nt6.33□□□□□ -1.4
TY1A-LR1P0CX68 YMR315WYMR315W 1050 nt6.33□□□□□ -1.4
TY1A-LR1P0CX68 YPL035CYPL035C 348 nt6.33□□□□□ -1.4
TY1A-LR1P0CX68 RPN7YPR108W 1290 nt6.33□□□□□ -1.4
TY1A-LR1P0CX68 NAT3YPR131C 588 nt6.33□□□□□ -1.4
TY1A-LR1P0CX68 THR4YCR053W 1545 nt6.33□□□□□ -1.4
TY1A-LR1P0CX68 SSL1YLR005W 1386 nt6.32□□□□□ -1.4
TY1A-LR1P0CX68 HTS1YPR033C 1641 nt6.32□□□□□ -1.4
TY1A-LR1P0CX68 BAP2YBR068C 1830 nt6.32□□□□□ -1.4
TY1A-LR1P0CX68 ERG11YHR007C 1593 nt6.32□□□□□ -1.4
TY1A-LR1P0CX68 YDL144CYDL144C 1071 nt6.32□□□□□ -1.4
TY1A-LR1P0CX68 SLO1YER180C-A 258 nt6.32□□□□□ -1.4
TY1A-LR1P0CX68 CDD1YLR245C 429 nt6.32□□□□□ -1.4
TY1A-LR1P0CX68 PDR17YNL264C 1053 nt6.32□□□□□ -1.4
TY1A-LR1P0CX68 YNR034W-AYNR034W-A 297 nt6.32□□□□□ -1.4
TY1A-LR1P0CX68 CMR3YPR013C 954 nt6.32□□□□□ -1.4
TY1A-LR1P0CX68 snR54snR54 86 nt6.32□□□□□ -1.4
TY1A-LR1P0CX68 NAM9YNL137C 1461 nt6.32□□□□□ -1.4
TY1A-LR1P0CX68 MSY1YPL097W 1479 nt6.32□□□□□ -1.4
TY1A-LR1P0CX68 FMP30YPL103C 1407 nt6.32□□□□□ -1.4
TY1A-LR1P0CX68 SSE2YBR169C 2082 nt6.32□□□□□ -1.4
TY1A-LR1P0CX68 YFR006WYFR006W 1608 nt6.32□□□□□ -1.4
TY1A-LR1P0CX68 RGP1YDR137W 1992 nt6.31□□□□□ -1.4
TY1A-LR1P0CX68 ECM38YLR299W 1983 nt6.31□□□□□ -1.4
TY1A-LR1P0CX68 MRM2YGL136C 963 nt6.31□□□□□ -1.4
TY1A-LR1P0CX68 SOL4YGR248W 768 nt6.31□□□□□ -1.4
TY1A-LR1P0CX68 PRY2YKR013W 990 nt6.31□□□□□ -1.4
TY1A-LR1P0CX68 YLR050CYLR050C 486 nt6.31□□□□□ -1.4
TY1A-LR1P0CX68 ZIM17YNL310C 525 nt6.31□□□□□ -1.4
TY1A-LR1P0CX68 MSN1YOL116W 1149 nt6.31□□□□□ -1.4
TY1A-LR1P0CX68 VMA13YPR036W 1437 nt6.31□□□□□ -1.4
TY1A-LR1P0CX68 YJL163CYJL163C 1668 nt6.3□□□□□ -1.4
TY1A-LR1P0CX68 TMN2YDR107C 2019 nt6.3□□□□□ -1.4
TY1A-LR1P0CX68 JHD1YER051W 1479 nt6.3□□□□□ -1.4
TY1A-LR1P0CX68 RSM24YDR175C 960 nt6.3□□□□□ -1.4
TY1A-LR1P0CX68 YAR023CYAR023C 540 nt6.3□□□□□ -1.4
TY1A-LR1P0CX68 SEC13YLR208W 894 nt6.3□□□□□ -1.4
TY1A-LR1P0CX68 YOR277CYOR277C 309 nt6.3□□□□□ -1.4
TY1A-LR1P0CX68 snR3snR3 194 nt6.3□□□□□ -1.4
TY1A-LR1P0CX68 YPK2YMR104C 2034 nt6.3□□□□□ -1.4
TY1A-LR1P0CX68 PMS1YNL082W 2622 nt6.29□□□□□ -1.4
TY1A-LR1P0CX68 BIK1YCL029C 1323 nt6.29□□□□□ -1.4
TY1A-LR1P0CX68 JEM1YJL073W 1938 nt6.29□□□□□ -1.4
TY1A-LR1P0CX68 SPC1YJR010C-A 285 nt6.29□□□□□ -1.4
TY1A-LR1P0CX68 YKL102CYKL102C 306 nt6.29□□□□□ -1.4
TY1A-LR1P0CX68 MCR1YKL150W 909 nt6.29□□□□□ -1.4
TY1A-LR1P0CX68 SPH1YLR313C 1593 nt6.29□□□□□ -1.4
TY1A-LR1P0CX68 SEN54YPL083C 1404 nt6.29□□□□□ -1.4
TY1A-LR1P0CX68 SWT1YOR166C 1377 nt6.29□□□□□ -1.4
TY1A-LR1P0CX68 CYB2YML054C 1776 nt6.29□□□□□ -1.4
TY1A-LR1P0CX68 GLR1YPL091W 1452 nt6.28□□□□□ -1.4
TY1A-LR1P0CX68 MUD2YKL074C 1584 nt6.28□□□□□ -1.4
TY1A-LR1P0CX68 YEL075W-AYEL075W-A 612 nt6.28□□□□□ -1.4
TY1A-LR1P0CX68 MRPL9YGR220C 810 nt6.28□□□□□ -1.4
TY1A-LR1P0CX68 YHL030W-AYHL030W-A 462 nt6.28□□□□□ -1.4
TY1A-LR1P0CX68 BNA1YJR025C 534 nt6.28□□□□□ -1.4
TY1A-LR1P0CX68 PET10YKR046C 852 nt6.28□□□□□ -1.4
TY1A-LR1P0CX68 MCM1YMR043W 861 nt6.28□□□□□ -1.4
TY1A-LR1P0CX68 YCL021W-AYCL021W-A 378 nt6.28□□□□□ -1.4
TY1A-LR1P0CX68 AVT4YNL101W 2142 nt6.28□□□□□ -1.4
TY1A-LR1P0CX68 EGD2YHR193C 525 nt6.27□□□□□ -1.41
TY1A-LR1P0CX68 ASF1YJL115W 840 nt6.27□□□□□ -1.41
TY1A-LR1P0CX68 ERP1YAR002C-A 660 nt6.27□□□□□ -1.41
TY1A-LR1P0CX68 AHP1YLR109W 531 nt6.27□□□□□ -1.41
TY1A-LR1P0CX68 ERD2YBL040C 660 nt6.27□□□□□ -1.41
TY1A-LR1P0CX68 CKA2YOR061W 1020 nt6.27□□□□□ -1.41
TY1A-LR1P0CX68 YOR186WYOR186W 435 nt6.27□□□□□ -1.41
TY1A-LR1P0CX68 YRO2YBR054W 1035 nt6.27□□□□□ -1.41
TY1A-LR1P0CX68 SRP101YDR292C 1866 nt6.27□□□□□ -1.41
TY1A-LR1P0CX68 YPL109CYPL109C 1974 nt6.27□□□□□ -1.41
TY1A-LR1P0CX68 BDF2YDL070W 1917 nt6.27□□□□□ -1.41
TY1A-LR1P0CX68 SEO1YAL067C 1782 nt6.26□□□□□ -1.41
TY1A-LR1P0CX68 TFB2YPL122C 1542 nt6.26□□□□□ -1.41
TY1A-LR1P0CX68 CCT3YJL014W 1605 nt6.26□□□□□ -1.41
TY1A-LR1P0CX68 PBP4YDL053C 558 nt6.26□□□□□ -1.41
TY1A-LR1P0CX68 YDL163WYDL163W 303 nt6.26□□□□□ -1.41
TY1A-LR1P0CX68 FAL1YDR021W 1200 nt6.26□□□□□ -1.41
TY1A-LR1P0CX68 NCB2YDR397C 441 nt6.26□□□□□ -1.41
TY1A-LR1P0CX68 YDR413CYDR413C 576 nt6.26□□□□□ -1.41
TY1A-LR1P0CX68 RMT2YDR465C 1239 nt6.26□□□□□ -1.41
TY1A-LR1P0CX68 PUP3YER094C 618 nt6.26□□□□□ -1.41
TY1A-LR1P0CX68 RTS3YGR161C 792 nt6.26□□□□□ -1.41
TY1A-LR1P0CX68 MRPL31YKL138C 396 nt6.26□□□□□ -1.41
TY1A-LR1P0CX68 CAR2YLR438W 1275 nt6.26□□□□□ -1.41
TY1A-LR1P0CX68 YPT53YNL093W 663 nt6.26□□□□□ -1.41
TY1A-LR1P0CX68 YBR284WYBR284W 2394 nt6.26□□□□□ -1.41
TY1A-LR1P0CX68 PTC3YBL056W 1407 nt6.25□□□□□ -1.41
TY1A-LR1P0CX68 OSM1YJR051W 1506 nt6.25□□□□□ -1.41
TY1A-LR1P0CX68 CNE1YAL058W 1509 nt6.25□□□□□ -1.41
TY1A-LR1P0CX68 UBC1YDR177W 648 nt6.25□□□□□ -1.41
TY1A-LR1P0CX68 SEC20YDR498C 1152 nt6.25□□□□□ -1.41
TY1A-LR1P0CX68 YHI9YHR029C 885 nt6.25□□□□□ -1.41
TY1A-LR1P0CX68 BSC3YLR465C 309 nt6.25□□□□□ -1.41
TY1A-LR1P0CX68 RPL13BYMR142C 600 nt6.25□□□□□ -1.41
TY1A-LR1P0CX68 NSL1YPL233W 651 nt6.25□□□□□ -1.41
TY1A-LR1P0CX68 YPR170CYPR170C 336 nt6.25□□□□□ -1.41
TY1A-LR1P0CX68 RTC2YBR147W 891 nt6.25□□□□□ -1.41
TY1A-LR1P0CX68 YPC1YBR183W 951 nt6.25□□□□□ -1.41
TY1A-LR1P0CX68 RKM3YBR030W 1659 nt6.25□□□□□ -1.41
TY1A-LR1P0CX68 CEF1YMR213W 1773 nt6.24□□□□□ -1.41
Retrieved 100 of 7,029 protein–RNA pairs in 18.4 ms