Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBCP0CG48 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
UBCP0CG48 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
UBCP0CG48 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
UBCP0CG48 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBCP0CG48 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBCP0CG48 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.1■□□□□ 0.65
UBCP0CG48 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
UBCP0CG48 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.1■□□□□ 0.65
UBCP0CG48 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBCP0CG48 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.1■□□□□ 0.65
UBCP0CG48 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBCP0CG48 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBCP0CG48 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBCP0CG48 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBCP0CG48 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBCP0CG48 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.09■□□□□ 0.65
UBCP0CG48 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBCP0CG48 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.09■□□□□ 0.65
UBCP0CG48 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
UBCP0CG48 AC004687.1-201ENST00000579003 1625 ntBASIC19.09■□□□□ 0.65
UBCP0CG48 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
UBCP0CG48 FBXW4P1-201ENST00000426721 2239 ntBASIC19.09■□□□□ 0.65
UBCP0CG48 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
UBCP0CG48 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBCP0CG48 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBCP0CG48 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
UBCP0CG48 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBCP0CG48 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBCP0CG48 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
UBCP0CG48 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.08■□□□□ 0.65
UBCP0CG48 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.08■□□□□ 0.65
UBCP0CG48 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
UBCP0CG48 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.08■□□□□ 0.64
UBCP0CG48 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.08■□□□□ 0.64
UBCP0CG48 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBCP0CG48 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.08■□□□□ 0.64
UBCP0CG48 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UBCP0CG48 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
UBCP0CG48 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBCP0CG48 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBCP0CG48 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBCP0CG48 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.07■□□□□ 0.64
UBCP0CG48 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBCP0CG48 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
UBCP0CG48 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.07■□□□□ 0.64
UBCP0CG48 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.07■□□□□ 0.64
UBCP0CG48 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBCP0CG48 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.07■□□□□ 0.64
UBCP0CG48 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.07■□□□□ 0.64
UBCP0CG48 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBCP0CG48 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.07■□□□□ 0.64
UBCP0CG48 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
UBCP0CG48 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBCP0CG48 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBCP0CG48 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBCP0CG48 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBCP0CG48 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
UBCP0CG48 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBCP0CG48 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.07■□□□□ 0.64
UBCP0CG48 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBCP0CG48 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.06■□□□□ 0.64
UBCP0CG48 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.06■□□□□ 0.64
UBCP0CG48 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBCP0CG48 C17orf82-201ENST00000623772 1530 ntBASIC19.06■□□□□ 0.64
UBCP0CG48 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBCP0CG48 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
UBCP0CG48 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.06■□□□□ 0.64
UBCP0CG48 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
UBCP0CG48 MIR4787-201ENST00000607364 84 ntBASIC19.06■□□□□ 0.64
UBCP0CG48 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.06■□□□□ 0.64
UBCP0CG48 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
UBCP0CG48 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
UBCP0CG48 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBCP0CG48 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
UBCP0CG48 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
UBCP0CG48 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.05■□□□□ 0.64
UBCP0CG48 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.05■□□□□ 0.64
UBCP0CG48 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBCP0CG48 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBCP0CG48 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBCP0CG48 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBCP0CG48 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBCP0CG48 CA15P2-201ENST00000611168 834 ntBASIC19.05■□□□□ 0.64
UBCP0CG48 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
UBCP0CG48 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.05■□□□□ 0.64
UBCP0CG48 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.05■□□□□ 0.64
UBCP0CG48 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.05■□□□□ 0.64
UBCP0CG48 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBCP0CG48 AL121603.2-201ENST00000557373 2117 ntBASIC19.04■□□□□ 0.64
UBCP0CG48 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.04■□□□□ 0.64
UBCP0CG48 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.04■□□□□ 0.64
UBCP0CG48 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.04■□□□□ 0.64
UBCP0CG48 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.04■□□□□ 0.64
UBCP0CG48 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
UBCP0CG48 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBCP0CG48 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.04■□□□□ 0.64
UBCP0CG48 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.04■□□□□ 0.64
UBCP0CG48 AC010997.5-201ENST00000609182 354 ntBASIC19.04■□□□□ 0.64
UBCP0CG48 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms