Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC28.07■■■□□ 2.08
SNRPA1P09661 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC28.07■■■□□ 2.08
SNRPA1P09661 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC28.07■■■□□ 2.08
SNRPA1P09661 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
SNRPA1P09661 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
SNRPA1P09661 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SNRPA1P09661 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
SNRPA1P09661 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC28.06■■■□□ 2.08
SNRPA1P09661 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC28.06■■■□□ 2.08
SNRPA1P09661 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC28.06■■■□□ 2.08
SNRPA1P09661 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC28.06■■■□□ 2.08
SNRPA1P09661 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
SNRPA1P09661 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC28.05■■■□□ 2.08
SNRPA1P09661 ASL-203ENST00000380839 1765 ntTSL 5 BASIC28.05■■■□□ 2.08
SNRPA1P09661 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC28.05■■■□□ 2.08
SNRPA1P09661 CPT2-209ENST00000636935 803 ntTSL 5 BASIC28.05■■■□□ 2.08
SNRPA1P09661 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC28.04■■■□□ 2.08
SNRPA1P09661 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
SNRPA1P09661 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
SNRPA1P09661 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
SNRPA1P09661 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
SNRPA1P09661 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
SNRPA1P09661 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
SNRPA1P09661 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC28.04■■■□□ 2.08
SNRPA1P09661 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC28.04■■■□□ 2.08
SNRPA1P09661 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
SNRPA1P09661 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC28.03■■■□□ 2.08
SNRPA1P09661 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC28.03■■■□□ 2.08
SNRPA1P09661 AC137761.2-201ENST00000561729 223 ntBASIC28.03■■■□□ 2.08
SNRPA1P09661 AC145350.3-201ENST00000569033 163 ntBASIC28.03■■■□□ 2.08
SNRPA1P09661 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC28.03■■■□□ 2.08
SNRPA1P09661 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
SNRPA1P09661 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC28.02■■■□□ 2.08
SNRPA1P09661 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
SNRPA1P09661 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
SNRPA1P09661 STX7-201ENST00000367937 1090 ntTSL 5 BASIC28.02■■■□□ 2.08
SNRPA1P09661 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC28.02■■■□□ 2.08
SNRPA1P09661 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC28.02■■■□□ 2.08
SNRPA1P09661 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC28.02■■■□□ 2.08
SNRPA1P09661 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
SNRPA1P09661 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
SNRPA1P09661 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
SNRPA1P09661 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC28.02■■■□□ 2.08
SNRPA1P09661 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
SNRPA1P09661 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
SNRPA1P09661 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC28.01■■■□□ 2.07
SNRPA1P09661 DBI-210ENST00000542275 757 ntTSL 5 BASIC28.01■■■□□ 2.07
SNRPA1P09661 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC28.01■■■□□ 2.07
SNRPA1P09661 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC28.01■■■□□ 2.07
SNRPA1P09661 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC28.01■■■□□ 2.07
SNRPA1P09661 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC28.01■■■□□ 2.07
SNRPA1P09661 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC28.01■■■□□ 2.07
SNRPA1P09661 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC28■■■□□ 2.07
SNRPA1P09661 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC28■■■□□ 2.07
SNRPA1P09661 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC28■■■□□ 2.07
SNRPA1P09661 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC28■■■□□ 2.07
SNRPA1P09661 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
SNRPA1P09661 HSCB-202ENST00000398941 955 ntTSL 2 BASIC28■■■□□ 2.07
SNRPA1P09661 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC28■■■□□ 2.07
SNRPA1P09661 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC28■■■□□ 2.07
SNRPA1P09661 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC28■■■□□ 2.07
SNRPA1P09661 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC28■■■□□ 2.07
SNRPA1P09661 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC28■■■□□ 2.07
SNRPA1P09661 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
SNRPA1P09661 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC28■■■□□ 2.07
SNRPA1P09661 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
SNRPA1P09661 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
SNRPA1P09661 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
SNRPA1P09661 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
SNRPA1P09661 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC27.99■■■□□ 2.07
SNRPA1P09661 AC016769.1-201ENST00000409132 1010 ntBASIC27.99■■■□□ 2.07
SNRPA1P09661 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC27.99■■■□□ 2.07
SNRPA1P09661 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC27.99■■■□□ 2.07
SNRPA1P09661 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
SNRPA1P09661 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
SNRPA1P09661 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC27.99■■■□□ 2.07
SNRPA1P09661 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC27.99■■■□□ 2.07
SNRPA1P09661 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
SNRPA1P09661 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC27.98■■■□□ 2.07
SNRPA1P09661 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC27.98■■■□□ 2.07
SNRPA1P09661 AC080038.1-201ENST00000611274 1154 ntBASIC27.98■■■□□ 2.07
SNRPA1P09661 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC27.98■■■□□ 2.07
SNRPA1P09661 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
SNRPA1P09661 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC27.97■■■□□ 2.07
SNRPA1P09661 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
SNRPA1P09661 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC27.97■■■□□ 2.07
SNRPA1P09661 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
SNRPA1P09661 KRT19P1-201ENST00000405746 1186 ntBASIC27.97■■■□□ 2.07
SNRPA1P09661 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC27.97■■■□□ 2.07
SNRPA1P09661 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
SNRPA1P09661 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
SNRPA1P09661 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
SNRPA1P09661 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC27.96■■■□□ 2.07
SNRPA1P09661 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
SNRPA1P09661 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC27.96■■■□□ 2.07
SNRPA1P09661 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC27.96■■■□□ 2.07
SNRPA1P09661 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC27.96■■■□□ 2.07
SNRPA1P09661 AC079140.4-201ENST00000507448 529 ntBASIC27.96■■■□□ 2.07
SNRPA1P09661 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC27.96■■■□□ 2.07
SNRPA1P09661 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC27.96■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms