Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.96■□□□□ 0.79
P04436 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
P04436 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
P04436 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
P04436 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
P04436 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.96■□□□□ 0.79
P04436 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
P04436 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
P04436 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
P04436 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
P04436 LINC01960-201ENST00000563759 1884 ntBASIC19.95■□□□□ 0.78
P04436 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
P04436 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.95■□□□□ 0.78
P04436 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.95■□□□□ 0.78
P04436 AC123595.1-201ENST00000440769 1046 ntBASIC19.95■□□□□ 0.78
P04436 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.95■□□□□ 0.78
P04436 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.95■□□□□ 0.78
P04436 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.95■□□□□ 0.78
P04436 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.95■□□□□ 0.78
P04436 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
P04436 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.95■□□□□ 0.78
P04436 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
P04436 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
P04436 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.94■□□□□ 0.78
P04436 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
P04436 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
P04436 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.94■□□□□ 0.78
P04436 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.94■□□□□ 0.78
P04436 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
P04436 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
P04436 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.94■□□□□ 0.78
P04436 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.94■□□□□ 0.78
P04436 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.94■□□□□ 0.78
P04436 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
P04436 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
P04436 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.94■□□□□ 0.78
P04436 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
P04436 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.94■□□□□ 0.78
P04436 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.93■□□□□ 0.78
P04436 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
P04436 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
P04436 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
P04436 AC034268.1-201ENST00000441047 882 ntBASIC19.93■□□□□ 0.78
P04436 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
P04436 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.93■□□□□ 0.78
P04436 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.93■□□□□ 0.78
P04436 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.93■□□□□ 0.78
P04436 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
P04436 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
P04436 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
P04436 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
P04436 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
P04436 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.92■□□□□ 0.78
P04436 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
P04436 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
P04436 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
P04436 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
P04436 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.92■□□□□ 0.78
P04436 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
P04436 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
P04436 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
P04436 LINC02228-203ENST00000641970 1355 ntBASIC19.92■□□□□ 0.78
P04436 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
P04436 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
P04436 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
P04436 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
P04436 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
P04436 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
P04436 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
P04436 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.91■□□□□ 0.78
P04436 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
P04436 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
P04436 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
P04436 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
P04436 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
P04436 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
P04436 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
P04436 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
P04436 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
P04436 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
P04436 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.9■□□□□ 0.78
P04436 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.9■□□□□ 0.78
P04436 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
P04436 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.9■□□□□ 0.78
P04436 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.9■□□□□ 0.78
P04436 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
P04436 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
P04436 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
P04436 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
P04436 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
P04436 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
P04436 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.89■□□□□ 0.77
P04436 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.89■□□□□ 0.77
P04436 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.89■□□□□ 0.77
P04436 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.89■□□□□ 0.77
P04436 SMUG1P1-201ENST00000590640 811 ntBASIC19.89■□□□□ 0.77
P04436 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
P04436 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
P04436 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
P04436 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms