Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.96■□□□□ 0.79
P04436 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
P04436 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
P04436 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
P04436 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
P04436 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.96■□□□□ 0.79
P04436 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
P04436 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
P04436 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
P04436 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
P04436 LINC01960-201ENST00000563759 1884 ntBASIC19.95■□□□□ 0.78
P04436 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
P04436 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.95■□□□□ 0.78
P04436 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.95■□□□□ 0.78
P04436 AC123595.1-201ENST00000440769 1046 ntBASIC19.95■□□□□ 0.78
P04436 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.95■□□□□ 0.78
P04436 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.95■□□□□ 0.78
P04436 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.95■□□□□ 0.78
P04436 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.95■□□□□ 0.78
P04436 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
P04436 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.95■□□□□ 0.78
P04436 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
P04436 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
P04436 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.94■□□□□ 0.78
P04436 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
P04436 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
P04436 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.94■□□□□ 0.78
P04436 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.94■□□□□ 0.78
P04436 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
P04436 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
P04436 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.94■□□□□ 0.78
P04436 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.94■□□□□ 0.78
P04436 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.94■□□□□ 0.78
P04436 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
P04436 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
P04436 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.94■□□□□ 0.78
P04436 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
P04436 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.94■□□□□ 0.78
P04436 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.93■□□□□ 0.78
P04436 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
P04436 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
P04436 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
P04436 AC034268.1-201ENST00000441047 882 ntBASIC19.93■□□□□ 0.78
P04436 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
P04436 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.93■□□□□ 0.78
P04436 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.93■□□□□ 0.78
P04436 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.93■□□□□ 0.78
P04436 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
P04436 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
P04436 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
P04436 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
P04436 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
P04436 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.92■□□□□ 0.78
P04436 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
P04436 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
P04436 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
P04436 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
P04436 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.92■□□□□ 0.78
P04436 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
P04436 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
P04436 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
P04436 LINC02228-203ENST00000641970 1355 ntBASIC19.92■□□□□ 0.78
P04436 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
P04436 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
P04436 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
P04436 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
P04436 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
P04436 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
P04436 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
P04436 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.91■□□□□ 0.78
P04436 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
P04436 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
P04436 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
P04436 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
P04436 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
P04436 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
P04436 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
P04436 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
P04436 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
P04436 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
P04436 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.9■□□□□ 0.78
P04436 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.9■□□□□ 0.78
P04436 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
P04436 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.9■□□□□ 0.78
P04436 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.9■□□□□ 0.78
P04436 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
P04436 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
P04436 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
P04436 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
P04436 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
P04436 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
P04436 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.89■□□□□ 0.77
P04436 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.89■□□□□ 0.77
P04436 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.89■□□□□ 0.77
P04436 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.89■□□□□ 0.77
P04436 SMUG1P1-201ENST00000590640 811 ntBASIC19.89■□□□□ 0.77
P04436 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
P04436 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
P04436 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
P04436 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms